UFO03839.5prime Sequence
903 bp (903 high quality bases) assembled on 2009-02-13
> UFO03839.5prime
CAGTCGACATGTCGTATATGCTCCCTCATTTGCACAATGGCTGGCAGGTG
GACCAGGCCATTCTCTCCGAGGAGGACCGAGTAGTTGTAATACGTTTCGG
TCACGATTGGGACCCCGCCTGCATGAAAATGGATGAGGTCATGTACAGCA
TCGCCGAGAAGGTGAAGAACTTTGCTGTCATCTATTTGGTGGACATTACC
GAGGTGCCGGACTTCAACAAGATGTACGAGTTGTACGATCCTTGCACGGT
GATGTTCTTCTTCCGCAACAAGCACATCATGATCGATTTGGGCACGGGCA
ACAACAACAAGATCAACTGGCCACTGGAGGACAAGCAGGAGATGATCGAC
ATTGTGGAAACGGTGTATCGAGGTGCCCGTAAGGGCCGTGGTCTGGTAGT
CTCGCCCAAGGACTACTCTACCAAGTACAGATACGCAAGCTTTCTAGACC
ATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATAATCATAAT
CATAATCATAATCACAACTAGCCTAGGAGATCCTGGTCATGACTAGTGCT
TGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACA
AATCCAGATGGAGTTCTGAGGTCATTACTGGATCTATCAACAGGAGTCCA
AGCGAGCTCGATATCAAATTACGCCCCGCCCCTGCCACTCATCGCAGTAC
TTGTTGTATTCATTAAAGCATTCTGCCGACATGGAAGCCATCACAAACGG
CATGATGAACCTGAATCGCCAGCGGCATCAGCACCTTGTCGCCTTGCGTT
AATATTTGCCATGGTGAAACGGGGGCGAAGAAGTAGTCCATATGGCCACG
TTAAATCAAACTGGTGAACTCCTCCAGGGATGCCTGAAACGAAAAACATA
TTC
UFO03839.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:09:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dim1-RA | 606 | CG3058-RA | 87..512 | 9..434 | 2130 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:09:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 4403514..4403861 | 87..434 | 1740 | 100 | Plus |
| 2L | 23513712 | 2L | 4403337..4403416 | 9..88 | 400 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 23:09:25 has no hits.
UFO03839.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-03 11:59:38 Download gff for
UFO03839.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Dim1-RA | 79..512 | 1..439 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:11:49 Download gff for
UFO03839.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Dim1-RA | 83..516 | 1..439 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:01:32 Download gff for
UFO03839.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Dim1-RA | 83..516 | 1..439 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:01:32 Download gff for
UFO03839.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 4403333..4403414 | 1..86 | 95 | -> | Plus |
| 2L | 4403514..4403861 | 87..434 | 100 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:11:49 Download gff for
UFO03839.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 4403333..4403414 | 1..86 | 95 | -> | Plus |
| arm_2L | 4403514..4403861 | 87..434 | 100 | == | Plus |
