UFO03848.5prime Sequence
1037 bp (919 high quality bases) assembled on 2009-02-13
> UFO03848.5prime
CAGTCGACATGGGAATGGTATCGAAACGCAAGAAGATGCACTATGGCGAT
ACCCATCTGCAGAGGAGATGGCGTGTGCGGAATCGACGTCGTGATCTCGA
CCAGATCGACGACGATCTGCAGACCCGGAGCGGTGAACTGATCAATCAGA
ATGTGGATCTCGACAAGCCGGGATTCGCGCAGTTCTACTGCGTGCACTGT
GCCAAGTACTTCATCGATGACACCGCCATGCAGGCACATTTCCGCACCAA
GGTGCACAAGAGGCGTCTCAAGGCCCTAGAGATCGAGCCGTACAGCATCG
AGGAGGCGGAACGCGCCGCGGGACGTGGCAGCTTCGTGAAGCCCAAGAAG
CGGGCGATGGAAACGCAGCCATCGAAGGAGGACGTGGTCGCTGGCAAGAG
GATCCGAGTGGAAGTGGTGCCCGAGGATACAGATGCCACCGATTCGCCAT
CGACGTCCAAAACGAAGCGCAAGAAAGTCGAGAAAATGGAGACAGCAAGC
TTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCA
TAATCATAATCATAATCATAATCACAACTAGCCCTAGGAGATCCTGGTCA
TGACTAGTGCTTGGATTCTCACCAATAAAAAAACGCCCGGCGGCAACCGA
GCGTTCTGAACAAATCCAGATGGAGTTTCTGAGGTCATTACTGGATCTAT
CAACAGGAAGTCCCAGCGAGCTCGATATCAAAATTACGCCCCGCCCTGCC
ACTCATCGCAGTACTGTTGTAATTCATTAAGCATTCTGCCGACAGGAAGC
CATCACAAACGGCATGATGAACCTGAATCGCCAGCGGCATCAGCACCTTG
TCGCCTTGCGTATAATATTGCCCATGGTGAAAACGGGGGCCGAGAAGTTG
TCCTTAATGCCACGTTAAATCAAACTGGTGAACTCACCCAGGGATTGCTG
AACTAAAAACTATTCTAATAACCCCTTAGGGAATAGGCCAGGTTTCACCG
TACCGCCCTTCTTTGACATATTAAGTGTAAGAAATTG
UFO03848.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:26:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3224-RA | 851 | CG3224-RA | 231..716 | 9..494 | 2430 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:26:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 6660687..6661172 | 494..9 | 2430 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:26:33 has no hits.
UFO03848.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-03 11:59:39 Download gff for
UFO03848.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3224-RA | 209..706 | 1..500 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:32:22 Download gff for
UFO03848.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3224-RA | 224..721 | 1..500 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:09:36 Download gff for
UFO03848.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3224-RA | 224..721 | 1..500 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:09:36 Download gff for
UFO03848.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 6660687..6661179 | 1..494 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:32:22 Download gff for
UFO03848.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 6554720..6555212 | 1..494 | 99 | | Minus |
