UFO03851.5prime Sequence
616 bp (616 high quality bases) assembled on 2009-02-13
> UFO03851.5prime
CAGTCGACATGGACCAGGAGAATTTCCACGGCTCCAGCTTGCCGCAGCAG
CTACAGAACCTCCACATCCAGCCGCAGCAGGCGTCCCCCAATCCTGTCCA
GACGGGATTTGCTCCACGGCGGCACTATAATAACCTTGTCGGCCTGGGCA
ATGGAAATGCCGTCAGTGGTAGTCCGGTGAAGGGTGCTCCGCTGGGGCAG
CGCCATGTGAAGCTCAAGAAGGAGAAGATATCCGCCCAGGTTGCGCAGCT
GTCTCAGCCAGGTCAGCTGCAGCTGTCAGATGTTGGTGATCCTGCCTTGG
CGGGCGGATCGGGCTTACAAGGTGGAGTCGGCCTTATGGGCGTAATATTG
CCCAGCGACGAGGCCTTAAAGTTCGTCAGCGAAACGGACGCCAATGGACT
GGCCATGAAGACGCCCGTCAGCATTCTGCAAGAGCTGCTAAGCCGACGAG
GAATTACTCCCGGCTATGAACTTGTCCAGATCGAGGGCGCCATACATGAG
CCGACCTTCCGGTTTCGCGTGTCCTTTAAAGACAAGGATACGCCCTTCAC
GGCCATGGGGGCAGGACGATCGAAAAAGGAGGCCAAGCATGCGGCGGCCC
CGTGCGCTCATCGACA
UFO03851.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:16:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| loqs-RD | 1334 | CG6866-RD | 180..787 | 8..616 | 3005 | 99.7 | Plus |
| loqs-RF | 2014 | CG6866-RF | 180..787 | 8..616 | 3005 | 99.7 | Plus |
| loqs-RE | 1876 | CG6866-RE | 180..787 | 8..616 | 3005 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:16:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 13382939..13383546 | 8..616 | 2980 | 99.7 | Plus |
Blast to na_te.dros performed on 2014-11-28 23:16:13 has no hits.
UFO03851.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-03 11:59:22 Download gff for
UFO03851.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| loqs-RC | 181..790 | 1..615 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:54:00 Download gff for
UFO03851.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| loqs-RE | 177..786 | 1..615 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:55:32 Download gff for
UFO03851.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| loqs-RE | 177..786 | 1..615 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:55:32 Download gff for
UFO03851.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 13382936..13383545 | 1..615 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:54:00 Download gff for
UFO03851.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 13382936..13383545 | 1..615 | 99 | | Plus |
