UFO03861.5prime Sequence
815 bp (814 high quality bases) assembled on 2009-02-13
> UFO03861.5prime
CAGTCGACATGGTGCTGGCCACGCCCCCTGTGAGCAAGGGCGGTAACGCG
GGCGGCCTCTTCATGGACCAGTATCAGCAGTACGCGGCCCACTGTGAAAC
CGCCGACAGTGGCAATGGCAGTGACCTGGAGAGCACCGGATTGCCCACCA
AACCGGATGACAGCGAGGAGAGTGGCCCCTCCTCGCTGGGCAGCGACTCC
ATGCACGGGAGCAGCACGGAGTACGTGCGACAGTCCGCCTCCCAGCCCAG
TGGCCAGCGGCAGCGACAGAAGTCCTTGCGGGTCCTGGGTGCCCTGCTCC
CCGACAGCCTGCTCCGCGACATACGGGACCGGAGGAGCACCGAGTATGTG
GTACAGTTCTCGCAGCCAGAGGATGAGGAGAAGATCCAGGTCCCCGACAA
GATTCCGGAGAAACCCAGTCCGTTCCGCCTGGCCCGCGAATCGCTGAGCG
AGGACAAAATAGAGGAGCTGCGGGCCGCAGTGGAGCGGGCCAACTTCGTT
CAAACCGGTGAGGAGACGCTGGACAGCATCGATGCCACATCGCAGTCTCT
TCCAGCCAGCAGCAACATCGGCGGACACCGCGGCAATATCAATTACAAGT
ATGCTGACGACCAATACTACAGCTTTCACATCAACGAGCACGAGAACTTC
GGTGCGAGAAGCGCGAGAAGTGGCGACGAGGCGGACCACTCCACGGGAGC
GGGATCGGAGGCTGGCTCCCGACAGCGGATCCTAACGGAGCAGCAAGACC
TCTTCGCCGGCTATCGGGACGTGCGATGTGGGGCCGTTCCACCCAGTCCA
CTATCCGAATCGGCC
UFO03861.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:20:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31559-RA | 2003 | CG31559-RA | 180..986 | 9..815 | 3945 | 99.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:20:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 6156256..6157056 | 808..9 | 3860 | 99.6 | Minus |
Blast to na_te.dros performed on 2014-11-28 23:20:41 has no hits.
UFO03861.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-03 11:59:18 Download gff for
UFO03861.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31559-RA | 165..978 | 1..815 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:57:11 Download gff for
UFO03861.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31559-RA | 173..986 | 1..815 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:58:08 Download gff for
UFO03861.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31559-RA | 173..986 | 1..815 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:58:08 Download gff for
UFO03861.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 6156250..6157062 | 1..815 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:57:11 Download gff for
UFO03861.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 1981972..1982784 | 1..815 | 99 | | Minus |
