UFO03868.5prime Sequence
980 bp (971 high quality bases) assembled on 2009-02-13
> UFO03868.5prime
CAGTCGACATGAAGTTCTTCGTGTGCATCTTGGCTGTGCTGGCTGTGGCC
CAGGCTGCCCCAGGTCTTCTGCCCCATGTGGATAGCCATCATGGTTACCA
CCATGAGGAACTGCCTCATCTGCTGGACGCTGAGATCCATCATTCGGATG
GCATCCATCTGGGACACAGTGCCGCTTTGGTGCACGATGATCACCATCTG
AACCATCATTTGGATCATCATTTGGATCACCACCTGGTTGAGTCGCTGCC
AACCACAGTGTACCACCATGAGCCACTTCACTACCACTACGCTCGCCTGC
ACTCCGCTCCGGTGGTGCACCATCATCACCATGACACCCACGCCGCCGTG
GTGCATCACAGTACCCCGGCCCACTTCGATGTCCACAGCCACTCGAACCT
CCTGTCCTTCGCCAAGCACGCCCTGCACGGAAAGTACGGAAAGGTCAGGA
TCACCGAGACCCATTATGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGG
GCCCAGGTAAGTGGTCATAATCATAATCATAATCATAATCATAATCACAA
CTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGATTCTCACCAATAA
AAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGATGGAGTTCT
GAGGTCATTACTGGATCTATCAACAGGAGTCCAAGCGAGCTCGATATCAA
ATTACGCCCCGCCCTGCCACTCATCGCAGTACTGTTGTAATTCATTAAGC
ATTCTGCCGACATGGAAGCCATCACAAACGGCATGATGAACCTGAATCGC
CAGCGGCATCAGCACCTTGTCGCCTTGCGTATAATATTTGCCCATGGTGA
AAACGGGGGCGAAGAAGTTGTCCATATTGTCACGTTAAATCAAAACTGGT
GAAATCACCCAGGGATTGGCTGAGACGAAAACATTATTCTTCGATAAACC
CTTTAGGGAATAGCCAGGTTTCACGTAAAC
UFO03868.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:44:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14147-RA | 761 | CG14147-RA | 91..549 | 9..467 | 2295 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:44:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 10972810..10973264 | 13..467 | 2275 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 21:44:06 has no hits.
UFO03868.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-03 11:59:15 Download gff for
UFO03868.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14147-RA | 77..552 | 1..475 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:37:55 Download gff for
UFO03868.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14147-RA | 83..558 | 1..475 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:39:14 Download gff for
UFO03868.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14147-RA | 83..558 | 1..475 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:39:14 Download gff for
UFO03868.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 10972806..10973264 | 9..467 | 99 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:37:55 Download gff for
UFO03868.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 10965906..10966364 | 9..467 | 99 | == | Plus |
