UFO03871.5prime Sequence
936 bp (936 high quality bases) assembled on 2009-02-13
> UFO03871.5prime
CAGTCGACATGATTGATGGGCATCTTGCGTACAAATTAACACCGGAATTA
CTCCTCGTGCACTGCAGGCCAAGTTCGGCGAACTTCCAACGATTTTCGAC
TCCACCCCAAACCCAAAAAAAAAAAGACATAACAAAAAAAGTAACGAAAA
AGGAAGATGCGTTTTGGCCCATTTCAAATGAAGCCGACTTTCAATTAGGC
AAAAACTTGGCAGCAAACCAAAAACAAAAGCAAGCTAATGAGACGACGAC
TGAGTTTGGCCGGAGGTGCGATCGTGACTTCGAATGCGACCAGTGTCAAA
GGCGCAGCTGGATATTCGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGG
GCCCAGGTAAGTGGTCATAATCATAATCATAATCATAATCATAATCACAA
CTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGATTCTCACCAATAA
AAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGATGGAGTTCT
GAGGTCATTACTGGATCTATCAACAGGAGTCCAAGCGAGCTCGATATCAA
ATTACGCCCCGCCCTGCCACTCATCGCAGTACTGTTTGTAATTCATTAAG
CATTCTGCCGACATGGAAGCCATCACAAACGGCATGATGAACCTGAATCG
CCAGCGGCATCAGCACCTTGTCGCCTTGCGTATAATATTTGCCCATGGTG
AAAACGGGGGCGAAGAAGTTGTCCATATTGGCCACGTTTAAATCAAAACT
GGTGAAACTCACCCAGGGATTGGCTGAAACAAAAACATATTCTCAATAAC
CCTTTAGGGAAATAGGCCAGGTTTCACCGTAACACGCCACATCTTGCAAT
ATATGTGTAGAAACTGCCGGAATCGTCGTGGTATCCACTCAAAGCGATGA
AAACGTTTCAGTTGCCTCATGGAAAACGGTGGTACA
UFO03871.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed on 2014-11-28 23:20:52 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:20:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 5436767..5437048 | 289..8 | 1410 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 23:20:51 has no hits.
UFO03871.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-03 11:59:20 Download gff for
UFO03871.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31647-RA | 612..927 | 1..317 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:58:14 Download gff for
UFO03871.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 5436684..5436711 | 290..317 | 100 | <- | Minus |
| 2L | 5436767..5437052 | 1..289 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:58:14 Download gff for
UFO03871.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 5436684..5436711 | 290..317 | 100 | <- | Minus |
| 2L | 5436767..5437052 | 1..289 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:57:19 Download gff for
UFO03871.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 5436684..5436711 | 290..317 | 100 | <- | Minus |
| arm_2L | 5436767..5437052 | 1..289 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:57:19 Download gff for
UFO03871.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 5436684..5436711 | 290..317 | 100 | <- | Minus |
| arm_2L | 5436767..5437052 | 1..289 | 98 | | Minus |
