UFO03872.5prime Sequence
1133 bp (992 high quality bases) assembled on 2009-02-13
> UFO03872.5prime
CAGTCGACATGTGGAAAATGCTGGATATGATGGAACTGTCCGAAGCAGAG
CTCTTCATGTTCGACTGCGACGATTGCTCGGGCACGCCCCTTGCCCCACC
GCCCCAGTTCCTCATCCCACCGCCACCAAGACCGCCGGCCCTGGCCGAAT
TCACGGTGGTGCCGCAGGATTGCAACGAGGAGCAATTGGCCCAGCAGCAA
TGGGAGAGCGATGTCTGCCAGGCAATGCCGGTAAGTGGGAAAATCTACCC
AAAATATGATAAGCCCATTATAAAAACTCGAAAAATTCTCCAATATGCAA
GCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAAT
CATAATCATAATCATAATCATAATCACAACTAGCCTAGGAGATCCTGGTC
ATGACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGA
GCGTTCTGAACAAATCCAGATGGAGTTCTGAGGTCATTACTGGATCTATC
AACAGGAGTCCAAGCGAGCTCGATATCAAATTACGCCCCGCCCTGCCACT
CATCGCAGTACTGTTGTAATTCATTAAGCATTCTGCCGACATGGAAGCCA
TCACAAACGGCATGATGAACCTGAATCGCCAGCGGCATCAGCACCTTGTC
GCCTTGCGTATAATATTTGCCCATGGTGAAAACGGGGGCGAAGAAGTTGT
CCATATTGGCCACGTTTAAATCAAAACTGGTGAAACTCACCCAGGGATTG
GCTGAGACGAAAAACATATTCTCAATAAAACCCTTTAGGGAAATAGGCCA
GGTTTTTCACCGTAACACGCCACATCTTGCGAATATATGTGTAGAAACTG
CCGGAAATCGTCGTGGTATCACTCCAGAGCGATGAAAACGTTTCATTTTG
TTCATGGAAAACGGTGTTACAAAGGTGAACACTATCCCATAATCACCAGC
TCCCGTCTTCTTGCCATACGAAATTCCGGGAGACATCATTAGGCGGGCAG
AATGTGAATAAAGGCCGATTAAACTTGGGCTTATTTTTCTTTACAGGCTC
TTTAAAAAGCCCTATATTTCACAGTGATAGTGTCGTGCCCGTAGGATACT
ATGAGCACACTGACGTGAAAAGCTGCTCATCAA
UFO03872.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:28:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| pxb-RC | 5086 | CG33207-RC | 599..820 | 9..230 | 1110 | 100 | Plus |
| pxb-RB | 3024 | CG33207-RB | 599..820 | 9..230 | 1110 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:28:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 15671959..15672246 | 9..296 | 1440 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:28:03 has no hits.
UFO03872.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-03 11:59:19 Download gff for
UFO03872.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| pxb-RA | 590..897 | 1..308 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:33:08 Download gff for
UFO03872.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| pxb-RB | 593..827 | 1..238 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:10:24 Download gff for
UFO03872.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| pxb-RB | 593..827 | 1..238 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed on 2014-11-28 20:10:24 has no hits.
Sim4 to na_arms.dmel.RELEASE5 performed on 2013-08-04 22:33:08 has no hits.
