UFO03874.5prime Sequence
994 bp (994 high quality bases) assembled on 2009-02-13
> UFO03874.5prime
CAGTCGACATGCGTTTCCACATGAAGAGCGGCAGCGAGGACAATGACATT
GTGGCGGCCACAGCCACTGCCGAGCATATCCGCAAGTTTGTCTTCAGCGG
ATCACCCGCCGAGCGACTGGAGATCAAAATACCTGAGCTGCTTCAGGGTG
CCTACTCCTTCTACACATGGCCTTGCGCACCAATTTTAGCCCACTTCCTG
TGGGAGCGCCGACAGACACTGGCGGGCAAGCGCATCCTGGAGCTGGGAAG
CGGCACCGCCCTGCCCGGCATTCTGGCGGCCAAATGCCGCGCCCAAGTGG
TACTTACTGACAACTGCATTCTGCCCAAGTCACTGGCCCATATCCGAAAG
TCCTGCCTGGCCAATCAACTGCAGCCGGGCGTTGATATCGATGTGGTGGG
CCTGAGTTGGGGCCTGCTGCTGAACAGCGTGTTCCGACTGCCGCCTCTGG
ACCTTATCATTGCAGCAGACTGCTTCTACGATCCCAGCGTGTTCGAGGAT
ATCGTGGTCACAGTTGCTTTTCTGCTGGAGCGAAATGCCGGGGCCAAATT
TATATTTACATACCAGGAGCGGAGCGCCGACTGGTCCATAGAGGCGCTGC
TCAAGAAGTGGAAGCTGCAGGCTTTACCCATCAGCATGGAGGACATTGGC
AAGGAGTCGGGAGTGGATCTGCTGGAGTTTATGGGCGGACACACTATTCA
TCTTCTGGAGATCACGCGCATCGAAAGCGATGGCTCAATAAATACAACAG
CAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCAT
AATCATAATCATAATCATAATCATAATCACAACTAGCCTAGGAGATCCTG
GTCATGACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAAC
CGAGCGTTCTGAACAATCAGATGGAGTTCTGAGGTCTTTACTGGATCTAT
CAACAGGGAGTCCAGCGAGCTCGATAATCAATTTACGCCCCGCC
UFO03874.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:20:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5013-RA | 973 | CG5013-RA | 119..859 | 9..749 | 3705 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:20:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 16049966..16050579 | 136..749 | 3070 | 100 | Plus |
| 3R | 32079331 | 3R | 16049788..16049916 | 9..137 | 645 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 23:20:32 has no hits.
UFO03874.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-03 11:59:11 Download gff for
UFO03874.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5013-RA | 118..861 | 9..753 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:57:06 Download gff for
UFO03874.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5013-RA | 119..862 | 9..753 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:58:03 Download gff for
UFO03874.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5013-RA | 119..862 | 9..753 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:58:03 Download gff for
UFO03874.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 16049788..16049916 | 9..137 | 100 | -> | Plus |
| 3R | 16049968..16050582 | 138..753 | 99 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:57:06 Download gff for
UFO03874.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 11875510..11875638 | 9..137 | 100 | -> | Plus |
| arm_3R | 11875690..11876304 | 138..753 | 99 | == | Plus |
