UFO03889.5prime Sequence
1106 bp (1015 high quality bases) assembled on 2009-02-13
> UFO03889.5prime
CAGTCGACATGAAACAGAACCCGTTCGTGTCGTCGTCGCGCAGGAAGAAC
CGCAAGCGTCACTTCCAGGCTCCCTCCCACATTCGCAGGCGCCTCATGTC
CGCTCCCCTCTCCAAGGAGCTGCGCCAGAAGTACAATGTGCGTTCCATGC
CCATCCGCCGCGACGATGAGGTCCAGGTGATCCGCGGCCACTTCAAGGGC
AACCAGGTGGGCAAGGTGGTCCAGGCCTACCGCAAAAAGTTCGTCGTCTA
CGTCGAGAAGATCCAGCGCGAGAACGCCAACGGCACCAACGTCTACGTGG
GCATCCATCCCAGCAAGGTGCTGATCGTCAAGCTGAAGCTCGACAAGGAC
CGCAAGGCCATCCTGGAGCGTCGCGGCAAGGGTCGTCTGGCCGCTCTCGG
CAAGGATAAGGGCAAGTACACCGAGGAGACCGCCGCCCAGCCCATGGAGA
CCGCGGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGT
GGTCATAATCATAATCATAATCATAATCATAATCACAACTAGCCTAGGAG
ATCCTGGTCATGACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGC
GGCAACCGAGCGTTCTGAACAAATCCAGATGGAGTTCTGAGGTCATTACT
GGATCTATCAACAGGAGTCCAAGCGAGCTCGATATCAAATTACGCCCCGC
CCTGCCACTCATCGCAGTACTGTTGTAATTCATTAAGCATTCTGCCGACA
TGGAAGCCATCACAAACGGCATGATGAACCTGAATCGCCAGCGGCATCAG
CACCTTGTCGCCTTGCGTATAATATTTGCCCATGGTGAAAACGGGGGCGA
AGAAGTTGTCCATATTGGCCACGTTTAAATCAAAACTGGTGAAACTCACC
CAGGGATTGGCTGAGACGAAAAACATATTCTCAATAAACCCTTTAGGAAA
TAGCCAGGTTTTCACCGTAACACGCCACATCTTGCAATATATGTGTAGAA
ACTGCCGAAATCGTCGTGTATCACTCCAAGACGATGAAAACGTTTCAGTT
TGCCTCATGAAACGGGTAACAGGTGAACCCATATCCAATACAGGCTCACG
GTTTCA
UFO03889.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:18:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| RpL26-RB | 652 | CG6846-RB | 55..501 | 9..455 | 2235 | 100 | Plus |
| RpL26-RA | 648 | CG6846-RA | 51..497 | 9..455 | 2235 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:18:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 18899320..18899766 | 9..455 | 2235 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 23:18:11 has no hits.
UFO03889.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-03 11:56:49 Download gff for
UFO03889.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| RpL26-RA | 73..530 | 1..459 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:55:22 Download gff for
UFO03889.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| RpL26-RA | 43..500 | 1..459 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:56:38 Download gff for
UFO03889.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| RpL26-RA | 43..500 | 1..459 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:56:38 Download gff for
UFO03889.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 18899312..18899766 | 1..455 | 99 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:55:22 Download gff for
UFO03889.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 18892412..18892866 | 1..455 | 99 | == | Plus |
