UFO03893.5prime Sequence
819 bp (818 high quality bases) assembled on 2009-02-13
> UFO03893.5prime
CAGTCGACATGACGAACATGCGGCCGCCGCAGAAGTCCAAGCTGCTGAAG
GTCGTCATACTGGGCGACGGAGGCGTTGGCAAGTCCGCCCTGCTCACCCG
ATTCGTCGCCAATCGCTACGAGGAGAACAACTTCCACACCATCGGCGTGG
AGTTCATGAACAAGGACATAGTCGTCGACGGGGAGCGCTACACTCTGCAG
ATATGGGACACCGCTGGCCAGGAGCGATTCCGGGCTCTACGCACCCCGTT
CTACAGAGGATCGGACATCTGTCTGCTCTGCTACGCACTCGACGACCGGG
ACAGCTTGAAGGGATTGGGTGTGTGGCGCAATGAGTTCCTCAACTACGCA
GATGTGGACCAGGACAAGTTTCCATTCATCGTGGTGGGAAATAAGAACGA
CATTCCGGCGCAGAAGCGACAGGTGAGCTCCGACGCAGTGCAGCAGTGGT
GCGCGGAGCAGAAGGTGGCCTGCCACATCGAGACGTCATCGAAGGCGGCA
ACCAATGTGACGGATGCGTTCGTCCTTGGCCTTCGCCAGTGGCGGCACAT
GGAGTGCGTGGCCGAGGCGGAACTGCGCCAGCACGGCGACACCATTGACC
TCACCCGCCCCATTCGCCTGGTGCAGCGGCGCATCTGTTGCACAGGCGGA
GGAGGCGGTGGCGGCGGCGTAGGGCAGGACGCGGATGGCGATGATGCCGC
CATGCACAGTCCGGGCAAGAAAGTGTTCGGCCAGAAGCGCAACGCCAGCA
AGGCGCCAGCCACCAATTATCGGCTAGCAGGCTTTCTAGACCATTCGTTT
GGGCGCGCGGGCCAGGTAA
UFO03893.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:08:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Rab9-RA | 1604 | CG9994-RA | 299..1066 | 9..776 | 3825 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:08:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 19434921..19435303 | 394..776 | 1900 | 99.7 | Plus |
| 2L | 23513712 | 2L | 19434665..19434861 | 199..395 | 985 | 100 | Plus |
| 2L | 23513712 | 2L | 19432872..19433063 | 9..200 | 960 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 23:08:04 has no hits.
UFO03893.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-03 11:56:45 Download gff for
UFO03893.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Rab9-RA | 272..1051 | 1..780 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:10:57 Download gff for
UFO03893.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Rab9-RA | 291..1070 | 1..780 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:00:52 Download gff for
UFO03893.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Rab9-RA | 291..1070 | 1..780 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:00:52 Download gff for
UFO03893.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 19432864..19433063 | 1..200 | 98 | -> | Plus |
| 2L | 19434667..19434861 | 201..395 | 100 | -> | Plus |
| 2L | 19434923..19435307 | 396..780 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:10:57 Download gff for
UFO03893.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 19432864..19433063 | 1..200 | 98 | -> | Plus |
| arm_2L | 19434667..19434861 | 201..395 | 100 | -> | Plus |
| arm_2L | 19434923..19435307 | 396..780 | 99 | | Plus |
