UFO03903.5prime Sequence
1159 bp (1045 high quality bases) assembled on 2009-02-13
> UFO03903.5prime
CAGTCGACATGTTGCGGAAACTATTATTTAACACACAAGCTGTATTAAAA
CAACAGTCAAACTTACATCACATAAGGCACTTGGCAACGCCCAAGATATT
GCAGCTTGAGCAAATTCACATCGATGAAGCCATCAAAATAGAACCCACGT
TAGCTGTATTCTCACCTGAAATCTGGCGAAGGGCCCATCAAACTTTTCAA
AACCACGGCTTGGAAACCGTGAATTTCCTTAGAATAGTTACCGGTAACCC
CGCGATTTTGAAAAGAACGCCGGACAAAATAATAAGCTGCCTGGAAATCT
GGAGGGCCTGTCAATTCGGCGAGAATCTACTGCACCTGCTCCTTACGAAG
TACCCCGAGTTACTGGACGTTAGCGACTCCCACCAGTTACTTTCCCACAT
CGGCTTCCTTCAAAGTCGCGTCTCCACCAGCAAAAATGTGTGGAAGTGTT
TGATGAACAGTCCGGATTTGATAGCACAATCCGAGGTATCTATTGAGGAG
AAACTGAACTTCATCACAGACGTGATGCGCATAGAAGTGCCGGAGTTGGT
TAAATCGGCAGCCCTTACCTTGTCATTCGAGGAGCTGCGTTGTCGCCACC
AGTTCCTGCTTCGTTTGGGCCTCTTTAAGCCACGACCTCCGAAAGCCGAT
CCAAATGAGCCGACTACGAACCCCAAACTCTATCAGATTACAGACACTTC
CGAGAAGAGTTTCGCCACAAAGATTTGCCACGTCACCCTGCCGGAATACG
AAGCCTTCAAGGATCTCTACGCCAAGGAACTGGAGCAAAAGTCCAGAAGA
AAGGAGGAGGATGAGCTTAGTGATGAAGATGACGCAAGCTTTCTAGACCA
TTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATAATCATAATC
ATAATCATAATCACAACTAGCCTAGAGATCCTGTTCATGACTAGTGCTTG
ATTCTCACCAATAAAAACGCCCGGCGGCAACCGAGCGTTCTTGAACAATC
CAGATGGAGTTCTGAGGTCATTACTGGATCTATCAACAGAGTCAAGCGAG
CTCGAAATCAATTTACGCCCCGCCCTGCACTTCTACGCAGTACTTGTTTG
TATTCATTAACGAATTCTTGCGACTTGCAGCATCTACAAACGCATGGATG
AACCTGAAT
UFO03903.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:03:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15390-RA | 929 | CG15390-RA | 44..868 | 9..833 | 4110 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:03:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 2374866..2375636 | 63..833 | 3840 | 99.9 | Plus |
| 2L | 23513712 | 2L | 2374756..2374809 | 9..62 | 270 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:03:18 has no hits.
UFO03903.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-03 11:56:04 Download gff for
UFO03903.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15390-RA | 68..899 | 9..841 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:31:40 Download gff for
UFO03903.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15390-RA | 44..875 | 9..841 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:46:13 Download gff for
UFO03903.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15390-RA | 44..875 | 9..841 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:46:13 Download gff for
UFO03903.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 2374756..2374809 | 9..62 | 100 | -> | Plus |
| 2L | 2374866..2375643 | 63..841 | 99 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:31:40 Download gff for
UFO03903.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 2374756..2374809 | 9..62 | 100 | -> | Plus |
| arm_2L | 2374866..2375643 | 63..841 | 99 | == | Plus |
