UFO03914.5prime Sequence
1127 bp (1023 high quality bases) assembled on 2009-02-13
> UFO03914.5prime
CAGTCGACATGTTCAAGTTGCTACTTTGCTGCCTTCTACTAACCATCGAC
AGTGGATGGGCCTTTAATCATGGCCAGGATCTAGTGGACTTTCAAACTTA
CGAGGACAATTTCAACAAGACCTATGCCTCAACTTCGGCTCGCAACTTCG
CCAACTACTACTTCATCTACAACCGCAACCAGGTGGCGCAGCACAATGCC
CAGGCCGATAGGAATCGCACCACCTACCGCGAGGCAGTGAATCAGTTCTC
GGACATCCGGCTCATCCAGTTCGCAGCCCTGCTGCCCAAAGCCGTGAATA
CGGTGACCTCGGCGGCCAGTGATCCACCGGCCAGTCAAGCGGCATCTGCC
AGCTTTGACATTATCACGGATTTCGGACTCACCGTGGCGGTGGAGGATCA
GGGCGTGAACTGCAGCAGTAGTTGGGCCTATGCCACCGCCAAGGCCGTGG
AGATCATGAATGCCGTGCAGACAGCCAATCCTCTGCCCTCGTCCTTGTCC
GCCCAGCAGCTGCTGGACTGTGCGGGCATGGGCACCGGATGCAGCACCCA
GACGCCCCTGGCTGCCCTCAACTATCTCACCCAGCTGACAGATGCGTATC
TCTATCCGGAGGTGGACTATCCGAATAACAATAGCCTGAAAACGCCGGGT
ATGTGCCAGCCCCCATCCTCTGTGTCAGTGGGCGTGAAGTTGGCCGGCTA
TTCCACGGTGGCCGACAACGATGATGCCGCCGTAATGCGTTACGTATCGA
ATGGATTCCCCGTCATAGTCGAGTACAATCCGGCTACCTTTGGATTCATG
CAGTACTCCAGTGGCGTCTATGTCCAGGAGACGCGTGCCCTGACCAATCC
AAAGAGCTCACAGTTCCTGGTGTCGTGGCTACGATCACGACGTGACTCCA
ATCTGGACTACTGGCGCTGCCTGACTCTTCGGCGACACGTGGGGCGAGGA
GGGTTACATCATGATCGTGCGCAGTCCAATCAGCCCATTGCAGATTGCGT
TCTTTCCCAGTGCGCTTGCCGCAGGCTTTCTAGACATTCGTTGGCGCGCG
TCCAGGTAGTGGTCCTATCATATCTATCATAATCTAATCCAACTAGCTAA
GGCGATCTGCCTGACTATGCGTTGAAT
UFO03914.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:26:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6337-RB | 1402 | CG6337-RB | 30..1054 | 4..1020 | 4860 | 98.7 | Plus |
| CG6337-RA | 1117 | CG6337-RA | 30..1054 | 4..1020 | 4860 | 98.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:26:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 13833923..13834848 | 1020..103 | 4210 | 98.5 | Minus |
| 2R | 25286936 | 2R | 13834966..13835067 | 105..4 | 495 | 99 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:26:30 has no hits.
UFO03914.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-03 11:55:55 Download gff for
UFO03914.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6337-RA | 19..1050 | 1..1024 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:32:20 Download gff for
UFO03914.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6337-RA | 27..1058 | 1..1024 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:09:35 Download gff for
UFO03914.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6337-RA | 27..1058 | 1..1024 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:09:35 Download gff for
UFO03914.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 13833919..13834846 | 105..1024 | 98 | <- | Minus |
| 2R | 13834967..13835066 | 1..104 | 96 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:32:20 Download gff for
UFO03914.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 9721424..9722351 | 105..1024 | 98 | <- | Minus |
| arm_2R | 9722472..9722571 | 1..104 | 96 | | Minus |
