UFO03919.5prime Sequence
1154 bp (1047 high quality bases) assembled on 2009-02-13
> UFO03919.5prime
CAGTCGACATGGTGAAATTGACTTTATACGGTTTGGACCCCAGTCCCCCA
GTTCGCGCTGTTAAGCTTACTTTGGCCGCTCTAAACCTAACCTACGAATA
TGTAAACGTTGACATTGTGGCTCGTGCCCAACTTTCACCGGAATATCTGG
AGAAGAATCCACAGCATACGGTGCCCACCCTGGAGGATGACGGTCACTAC
ATCTGGGATTCGCATGCCATTATTGCCTATTTGGTCTCGAAATATGCCGA
TTCCGATGCCCTATACCCGAAAGATCCTCTCAAGCGGGCTGTTGTGGATC
AGCGGCTGCACTTTGAATCCGGAGTGGTCTTTGCCAATGGCATAAGGAGC
ATATCGAAGTCAGTGCTCTTCCAGGGACAGACGAAAGTACCCAAGGAGCG
ATACGATGCCATTATCGAGATCTACGATTTTGTGGAAACTTTTCTCAAGG
GACAGGATTACATTGCTGGCAATCAACTGACCATTGCGGATTTCAGTCTC
GTTTCATCGGTGGCCTCCCTTGAGGCCTTCGTGGCCTTGGATACGACTAA
GTATCCCAGGATCGGTGCTTGGATCAAAAAGCTGGAACAGCTTCCATACT
ACGAGGAAGCCAATGGCAAGGGCGTCCGCCAGTTGGTGGCCATTTTCAAG
AAGACCAATTTCACATTCGAAGCAGCAAGCTTTCTAGACCATTCGTTTGG
CGCGCGGGCCCAGGTAAGTGGTCATAATCATAATCATAATCATAATCATA
ATCACAACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGATTCTCA
CCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGATG
GAGTTCTGAGGTCATTACTGGATCTATCACAGGAGTCCAAGCGAGCTCGA
TATCAAATTACGCCCCGCCCTGCCACTCATCGCAGTACTGTTGTAATTCA
TTAAGCATTCTGCGACATGGAAGCCATCACAACGGCATGATGAACTGATC
GCCAGCGGCATCAGCACCTTGTCGCCTTGCTCTAATATTGCCCATGTGAA
CGGGGGGAAGAAGTTGTCCAACTGGCCGTTAATCAACTGGTGAACTCTAC
CAGGATGCTGAAAGAAAAACTATTCTCAATACCTAAGAATTGGCAGTTCA
CGGT
UFO03919.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:48:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| GstE6-RA | 751 | CG17530-RA | 32..697 | 9..674 | 3330 | 100 | Plus |
| GstE5-RA | 734 | CG17527-RA | 28..685 | 7..664 | 800 | 75 | Plus |
| GstE7-RA | 765 | CG17531-RA | 169..642 | 146..619 | 495 | 74.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:48:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 18406042..18406707 | 9..674 | 3330 | 100 | Plus |
| 2R | 25286936 | 2R | 18404632..18405289 | 7..664 | 800 | 74.8 | Plus |
| 2R | 25286936 | 2R | 18407092..18407565 | 146..619 | 480 | 73.4 | Plus |
| 2R | 25286936 | 2R | 18408003..18408344 | 152..493 | 390 | 74.3 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:48:43 has no hits.
UFO03919.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-03 11:55:51 Download gff for
UFO03919.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| GstE6-RA | 20..695 | 1..674 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:54:58 Download gff for
UFO03919.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| GstE6-RA | 22..697 | 1..674 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:19:20 Download gff for
UFO03919.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| GstE6-RA | 22..697 | 1..674 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:19:20 Download gff for
UFO03919.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 18406032..18406707 | 1..674 | 99 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:54:58 Download gff for
UFO03919.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 14293537..14294212 | 1..674 | 99 | == | Plus |
