UFO03947.5prime Sequence
1120 bp (1012 high quality bases) assembled on 2009-02-13
> UFO03947.5prime
CAGTCGACATGATTAACCGCCGTCAGCGTTTGGAATTCGCCCTGACCCTA
TTGCCCTATGATCCCGAGACAGTTCAGTTGTCTGAAACGCAGAAAAAAGT
GGAGGCGATCATCGCCCGCCTGCGAACGGATGACTCCTTTACGGAGGAGG
AGAGCGATGACTGCAAGGTGCGGCGCATTCAAGATGCAAATGAGTTTGCC
GATTCCGCCATGCGACACATCGAAATGTCCGATAGTGGCAAGCTGAGCAC
TCTGGAAACTCTTACACTGGCTGCTGAGAAGCTGCTAAGGACACAGCGTT
CACCGGATCAGGATTTCGATGACATGGTGCAGGATGTGGAGTACTCGCAG
CTGATGAGGAACACCATCCAGGCGGTAAATGAGGCGCGTTTGAAGCTTCT
CCAGCAATGGGAGCGCAGTAAGCGCAAGGCTCTCGATCTCCTCACCATCG
AAATTGAAAAGGTCCAGGAAATGGATCAGGAGCCAGAGCACAAACAGTCT
CATGAGCAGGACCAGGATCAGGAGCAGAGTTCGGAGCCTTTTAACGCGTT
TCGCGATGGAGCCGATGAGCACAACACCTCGACGCCGAAAACAAACGACG
AAGATCTTGGTTTGGACGATGACGATGAGGACTATGTGCCCGGCGGAGAA
GAGACAATGGGTAACAAGAGGAAGCGTATCAAGAAACCGGTGACCTCCAC
TCCGAATGCGAAACGGCGGTGTCCTGGTTTCGAATTCGACCTGGACGGCG
AATCGCCGATGGTGACGATCGGTCCCAATGGCACCGAAGTTTCCCGCATT
AGCCTAAGTGCCATCAACTGGGACATGACCGGACCCTCGATCACGAGGAA
GCTGCTCTGCGAGATCTTCGACCGGGATACACTGGCCCATCATACGCTAT
CCGGAAAACCATCGCCGGCATTTAGGGACTGTGCCCGTCCCAGCAACAGC
AGCTGGATCCGCCTCAAGGTGCCGATCTGGTCTATCTGATGACTACAGCC
TGGACATGACTCCGCGGGAGTGCGCACTGCCATCACCACCAAATGGTGCG
GGATGAACAAGATGCTACGCTTCGCGATGCAGCGCAATCAAGCAAGCTTC
TGAAACATCGTTTGGGCCGC
UFO03947.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:51:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Bsg25A-RA | 1352 | CG12205-RA | 89..1170 | 9..1087 | 5165 | 99 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:51:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 4683276..4684313 | 1045..11 | 4950 | 99.1 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:51:06 has no hits.
UFO03947.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-03 11:55:39 Download gff for
UFO03947.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Bsg25A-RA | 80..1173 | 1..1091 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:10:31 Download gff for
UFO03947.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Bsg25A-RA | 82..1175 | 1..1091 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:27:49 Download gff for
UFO03947.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Bsg25A-RA | 82..1175 | 1..1091 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:27:49 Download gff for
UFO03947.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 4683228..4684313 | 11..1094 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:10:31 Download gff for
UFO03947.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 4683228..4684313 | 11..1094 | 98 | | Minus |
