UFO03951.5prime Sequence
1155 bp (1027 high quality bases) assembled on 2009-02-13
> UFO03951.5prime
CAGTCGACATGGCTAGCACTTCTCGCGCAGCTAGGAGCCAGAATGCCATC
CCCTCGCAGGAAGCGCAACAACCCGTCGATGTGGTCGACGCCAAGGTTCG
CGCCATTCTAAACTACATCCTTGATCATACCGCCCAGAAGATTCCCATAA
AGGACAAGGATTTGATAGCGGTGGCTGGGGACAAGAGCGAACTGAAGAAA
CGCCTGCCGCTGGTCACTAATCTGCTGGCCGAAACATTCGGTATAATACT
AACCCCACTGGACGCGACCACCAAGACGTTCATCTGCACTGCGGAGGAGC
CGGTGGCCTCCATTCACGAGCTGACGCCGGCTCAACGGCCGCAGTTCACG
CTGCTGTATATTATTCTCATGTACATCTTCCTGCGCGGCAACCGCATCGA
GGACTCGAAACTGTACGTTATGCTGGAGATGCTCAACATCTATCCAGACG
AAGAACATGGCTACTTCGGCCCCAATCTGCGCAAACAGATCGAGGAGACG
TTTGTGAAGCAACAATATCTGAAGCGGGAACGCTCACAGCTAAGTGCTTA
CGATGATTCCAAGACTTTCTTCCTTTGGGGACCACGTGCCAAGGCGGAGT
TCACATTCGAGCAAATGGTGCAATTCGCCTCCAAGCTGCTCAATCAGCAT
CCCAAGGTCTTCGGCCATCACCTCTCCATGGCCCAAGAAGGAGTAAACGC
GGAGGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTG
GTCATAATCATAATCATAATCATAATCATAATCACAACTAGCCTAGGAGA
TCCTGGTCATGACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCG
GCAACCGAGCGTTCTGAACAAATCCAGATGGAGTTCTGAGGTCATTACTG
GATCTATCAACAGGAGTCCAAGCGAGCTCGATATCAATTACGCCCGCCCT
GCCACTCATCGCAGTACTGTTGTAATTCATTAAGCATTCTGCGACTGGAA
GCCATCACAAACGCAATGATGAACCTGATCGCAGCGGCATCAGCACTTGT
CGCCTTGCGTATAATATTTTGCCCATGGGTGACAACGGGGGGCGAAAAGT
TGTCAATTGTAACGTTTAAATTAACTGGTGCACTCACAAGAATGCTGAAC
ACGAA
UFO03951.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:24:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| MAGE-RA | 943 | CG10059-RA | 112..812 | 4..704 | 3490 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:24:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 7154369..7155069 | 704..4 | 3490 | 99.9 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:24:24 has no hits.
UFO03951.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-03 11:55:14 Download gff for
UFO03951.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| MAGE-RA | 105..808 | 1..704 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:31:14 Download gff for
UFO03951.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| MAGE-RA | 109..812 | 1..704 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:08:44 Download gff for
UFO03951.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| MAGE-RA | 109..812 | 1..704 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:08:44 Download gff for
UFO03951.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 7154369..7155070 | 1..704 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:31:14 Download gff for
UFO03951.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 2980091..2980792 | 1..704 | 99 | | Minus |
