UFO03959.5prime Sequence
1103 bp (1000 high quality bases) assembled on 2009-02-13
> UFO03959.5prime
CAGTCGACATGAGCCTGATTAGACTGGGACTGGCGCTGCTGCTCCTGCTG
GCCACCGTGTCGCAGTTACTGCAGCCGGTCCAGGGACGCCGAAAGATGTG
CGGCGAGGCTCTGATCCAGGCACTGGATGTGATTTGTGTTAATGGATTTA
CACGCCGTGTCAGGCGGAGCAGTGCGTCTAAGGATGCTAGAGTGCGAGAC
CTTATCCGTAAGCTACAGCAGCCGGATGAGGACATTGAACAGGAAACGGA
AACGGGAAGGTTAAAGCAGAAGCATACGGATGCGGATACGGAGAAGGGTG
TGCCACCGGCCGTCGGAAGTGGACGAAAGTTGCGACGCCATCGGCGACGC
ATCGCCCACGAGTGTTGCAAGGAGGGCTGCACCTACGACGATATACTGGA
CTACTGCGCCGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGG
TAAGTGGTCATAATCATAATCATAATCATAATCATAATCACAACTAGCCT
AGGAGATCCTGGTCATGACTAGTGCTTGGATTCTCACCAATAAAAAACGC
CCGGCGGCAACCGAGCGTTCTGAACAAATCCAGATGGAGTTCTGAGGTCA
TTACTGGATCTATCAACAGGAGTCCAAGCGAGCTCGATATCAAATTACGC
CCCGCCCTGCCACTCATCGCAGTACTGTTGTAATTCATTAAGCATTCTGC
CGACATGGAAGCCATCACAAACGGCATGATGAACCTGAATCGCCAGCGGC
ATCAGCACCTTGTCGCCTTGCGTATAATATTTGCCCATGGTGAAAACGGG
GGCGAAGAAGTTGTCCATATTGGCCACGTTTAAATCAAAACTGGTGAAAC
TCACCCAGGGATTGGCTGAGACGAAAAACATATTCTCAATAAACCCTTTA
GGGAAATAGGCCAGGTTTTCACCGTACACGCCACATCTTGCGAATTAATG
TTGTAGAAACTGCCGGAAATCGTCGTGGTATTCACTCAGAGCGATGAAAA
CGGTTCAGTTTGCTCATGGAAACGGTGTAACAGGGGTGAACACTATCCAT
ATACCAGCCCACCGCCTTTTCATTGCATACGAATCGGAATGACCATTCAT
CAG
UFO03959.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:09:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ilp4-RA | 804 | CG6736-RA | 151..552 | 9..410 | 2010 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:09:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 9803651..9803887 | 410..174 | 1185 | 100 | Minus |
| 3L | 28110227 | 3L | 9803948..9804113 | 174..9 | 830 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:09:27 has no hits.
UFO03959.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-03 11:55:33 Download gff for
UFO03959.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ilp4-RA | 162..567 | 1..410 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:40:03 Download gff for
UFO03959.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ilp4-RA | 147..552 | 1..410 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:55:57 Download gff for
UFO03959.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ilp4-RA | 147..552 | 1..410 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:55:57 Download gff for
UFO03959.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 9803651..9803886 | 175..410 | 100 | <- | Minus |
| 3L | 9803948..9804117 | 1..174 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:40:03 Download gff for
UFO03959.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 9796751..9796986 | 175..410 | 100 | <- | Minus |
| arm_3L | 9797048..9797217 | 1..174 | 97 | | Minus |
