UFO03964.5prime Sequence
1136 bp (1014 high quality bases) assembled on 2009-02-13
> UFO03964.5prime
CAGTCGACATGAAGACTCTGATTGTTCTCGCTCTTCTGGTGGCCGCCGTT
TCGGCCCTACCGCAATTTGGATTCGGACGACCAGGATTTGGTGGCGGATT
CGGCGGCGGACCCTACGGCGGTGGCTTTGGCGGTGGTCCATATGGCGGCG
GCTTTGGCGGTGGTCCTTATGGCGGCGGTTTCGGAGGTGGTCCATACGGC
GGGGGATTCGGTAATCCCTATGGCGGCGGATTCGGCGGTGGCAGGCGTCA
TGGCGGTGGACGCGGTGGTGGCGGTGGTGCTGCCTCTGCCTCCGCATCTT
CGTCAGCCTCTGCAGCTGGTGGTGGTGGCGGAGCGGCCTCCTCATCCGCC
TCTTCATCCGCCTCCGCAAGCGGTGGTGGTTTCTACGGAGCAAGCTTTCT
AGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATAATC
ATAATCATAATCATAATCACAACTAGCCTAGGAGATCCTGGTCATGACTA
GTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCT
GAACAAATCCAGATGGAGTTCTGAGGTCATTACTGGATCTATCAACAGGA
GTCCAAGCGAGCTCGATATCAAATTACGCCCCGCCCTGCCACTCATCGCA
GTACTGTTGTAATTCATTAAGCATTCTGCCGACATGGAAGCCATCACAAA
CGGCATGATGAACCTGAATCGCCAGCGGCATCAGCACCTTGTCGCCTTGC
GTATAATATTTGCCCATGGTGAAAACGGGGGCGAAGAAGTTGTCCATATT
GGCCACGTTTAAATCAAAACTGGTGAAACTCACCAGGGATTGGCTGAGAC
GAAAAACATATTCTCATTAACCCTTTAGGGAAATAGGCCAGGTTTCACCG
TAACACGCACATCTTGCGAATATATGTGTAGAAACTGCCGGAAATCGTCG
TTGTATCACTCAGAGCGATGAAAACGTTTCAGTTTGCTCCATGGAAAACG
GTGTAACAAGGTGAACCTATCCATATTCACCAGCTCACCGTCTTCATTGC
CTACGAATTCGAATGAACATAATCAGGAGGCAAAAATGGGATATAAGCCG
ATAATCTGAGCTTAATTTTCTTTACAGTCTATAAAG
UFO03964.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:24:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7294-RA | 538 | CG7294-RA | 76..456 | 9..389 | 1905 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:24:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 10688816..10689196 | 389..9 | 1905 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:24:09 has no hits.
UFO03964.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-03 11:55:05 Download gff for
UFO03964.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7294-RA | 68..466 | 1..403 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:31:07 Download gff for
UFO03964.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7294-RA | 70..468 | 1..403 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:08:37 Download gff for
UFO03964.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7294-RA | 70..468 | 1..403 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:08:37 Download gff for
UFO03964.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 10688816..10689200 | 1..389 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:31:07 Download gff for
UFO03964.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 10688816..10689200 | 1..389 | 98 | | Minus |
