UFO03977.5prime Sequence
1118 bp (1019 high quality bases) assembled on 2009-02-13
> UFO03977.5prime
CAGTCGACATGTTAACAAAGATGTTCCTAGTGCTCTGCCTGGTGCTGGGC
ATCATGGCATCGGTATCCGGACAGCCACACGCCCGTGCCAGCGATCTCTA
CTATACGGACATAACGCCCGTGACCGACGAAACACGCTACACCACCCTCA
ATCCGGACGCACAGCTGAACGAGATGAACAAGGTGAAGCACTCGAAGGGC
AACGTGGTCTTCACCGCGGGAAAGCGGGCATCGGGTGACCGACTCATTGT
GAACCACTACGATGACGACAGCTTTCCCAGTGCCAAGGATGTGGAGGTGC
TCATGAGCTATCCGGCCGGAGCCAGCACAGGGGTCACGCTGACGAGCATC
GAGGTGTATGTGGACATGACGGCGGACGATGCCGGTGGCTATCTGACCAA
GGGTGGCATCGGTCAGACCAACGTGGAGATTCTGCTGACCTCCAATCAGA
CGCGCAGCTTCGTCTACGAGACGTTCATCTATGGGTACGCAAGCTTTCTA
GACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATAATCA
TAATCATAATCATAATCACAACTAGCCTAGGAGATCCTGGTCATGACTAG
TGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTG
AACAAATCCAGATGGAGTTCTGAGGTCATTACTGGATCTATCAACAGGAG
TCCAAGCGAGCTCGATATCAAATTACGCCCCGCCCTGCCACTCATCGCAG
TACTGTTGTAATTCATTAAGCATTCTGCCGACATGGAAAGCCATCACAAA
CGGCATGATGAACCTGAATCGCCAGCGGCATCAGCACCTTGTCGCCTTGC
GTATAATATTTGCCCATGGTGAAAACGGGGGCGAAGAGTTGTCCATATTG
GCCACGTTTAAATCAAACTGGTGAACTCACCCAGGGATTGGCTGAGACGA
AAACATATCTCATAACCCTTTAGGAAATAGGCAGTTTCACGTAACACGCC
ACATCTGCGATTATGGTGTAGACTGCGAAATCGTCTGCATTCACTCAGAA
GCGATGAACGTTTCAGTTTGCTCATGAACGGTGTTAAACAGTTAACTATC
CATATCACAGGCTCCGCT
UFO03977.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:26:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15044-RA | 822 | CG15044-RA | 116..595 | 9..488 | 2400 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:25:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 18491412..18491891 | 488..9 | 2400 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:25:58 has no hits.
UFO03977.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-03 11:54:55 Download gff for
UFO03977.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15044-RA | 103..585 | 3..488 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:32:04 Download gff for
UFO03977.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15044-RA | 113..595 | 3..488 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:09:20 Download gff for
UFO03977.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15044-RA | 113..595 | 3..488 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:09:20 Download gff for
UFO03977.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 18491412..18491894 | 3..488 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:32:04 Download gff for
UFO03977.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 18385445..18385927 | 3..488 | 99 | | Minus |
