UFO03982.5prime Sequence
1141 bp (1039 high quality bases) assembled on 2009-02-13
> UFO03982.5prime
CAGTCGACATGCTGCGCAAGTCAAAGAAACAGCCACAGACGGTGGCCGAG
AAGGTCAGCAAGCTGCTTGCCCATCCGAACGAGAGCGACAGCGCAGAGGA
CTCGGACTTCGATGTGGCCACAGGGCCACGTCTGGTGGACTTCGAGGAGG
AGGAGTACGACCTGCCGGATGCCCGGAGCACCGACTTTAGGAAGAGGAAC
GTCAAGCTGCTCTCGGAGCAGAGTGACCGCTACAAAGGAAAGATCAGCAG
TCGCAAGGAGTTGGATGACGATGAGGATAAGGATGATGAACAAGAGGTGT
CCTACGAAGAAAGCGATGAGGATGATGAGAACTTGACAAACTTTAAGCAG
AAGTTAAATGCTGGAGGAGCTGAAGACTCCGAGGAGGAAACGGCTGCTGG
ACATTCCGAATCTGGTGAAGAAAGTGAGGAGATTGAGAGCAATTTGACAG
ACTTTAAAAAAAAGTTTGAGGCTGGAGATTTTAAGTATGATGATGATGAG
GAGGAGGATGATGACTCTGAGGAAGAAGACCATAGCCAGGAAAGTGAAGG
AGATGACGACGATTCAGAAGATGATGAAGCAGAAGACGACGCAATCAAAC
CCTCGGATGTAATGTCCAAAACCAACCATCAAGCTGAAATCCAAAAAGGA
CTTGCCGTCCAAAACCAGCTGCGCATCTGGGAGCGTCTTCTCGAGCTAAG
GATCAACACCCAAAAGTTCACCAGCAAAGCGAATCAGCTTCCTGCACCGG
AAACTCTAACGAAACTGGCATCGGAAAGCGATGAGCTTCAGTCGGTGCTT
AACGAGGCCCAGGAGCGTTCATCCAAGCTACTGCAGCAACTGCTCTCCCT
CCAGTCAGCTCTCCACCAGCAATACTCCGAGATGAAAAAGTCGGTGAAGC
GCAAGCAGCCCACAGAGGATTCGGGTCCGGCGGTCAAAAAGTTTGGGTCT
GTGCTGCAGAGCATTTCCAACAATGATTGGTATCGCAATGAAGTCTGTAA
AGTGCGACGATCGTTACGAAACTCCTGACCCTCGGAGCGGGTGTCACTGC
AGGTCCTTGCAGAGACTACGACCTCATCAAAAGAATCCGGCATGCCTCTG
CGAATCGAAATGGCTCGTGGAAGTCCGACTCAGAACGCCAG
UFO03982.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:43:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Aatf-RA | 1703 | CG11188-RA | 87..1167 | 9..1082 | 5065 | 98.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:43:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 6717711..6718791 | 9..1082 | 4860 | 98.3 | Plus |
Blast to na_te.dros performed 2014-11-28 21:43:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Circe | 7450 | Circe CIRC 7450bp | 2159..2207 | 493..541 | 110 | 69.4 | Plus |
UFO03982.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-03 11:55:01 Download gff for
UFO03982.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11188-RA | 81..1143 | 1..1062 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:37:37 Download gff for
UFO03982.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11188-RA | 83..1145 | 1..1062 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:39:02 Download gff for
UFO03982.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Aatf-RA | 83..1145 | 1..1062 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:39:02 Download gff for
UFO03982.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 6717707..6718783 | 1..1074 | 98 | <- | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:37:37 Download gff for
UFO03982.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 6717707..6718783 | 1..1074 | 98 | <- | Plus |
