UFO03987.5prime Sequence
1137 bp (1027 high quality bases) assembled on 2009-02-13
> UFO03987.5prime
CAGTCGACATGCTGCGAGCGGGATGCCAGCTGCTGACGCAGTCCACCCTG
CCCACCGGGAAGACGGTCGGAAATAGTTTCGCCCTCGAGTTCGTCCGCTG
GCGCAGGAAACCGCGATGGCTGCCGGTGGCCAAGAGCAAGATGTTCCGCG
TGCCTGAACGCAAGAAGCAGTCGGAGGAGGAGCGCACGGAGCTCATGAGG
CTACACAACCAGTACAAAACGCAGCTTCGCTCAGTGCGTCAGTTTCTAAG
GGAGGAAGTCGTCCGCCACGAGGAAACATCCACAGCAGATCACATCGTGC
TCACTCCCGAGCAGGAGGAGGCCGAGTTCCAGAAATGCCTGGATGCCAAT
GCTGCCTGGAACGCTGCCATAGCCAAGGAGCGTGATCAGCGATTGGCCAA
GAAGCGTGAGGAAAAGGTGGCCTATATTCAGGAGCGATTGGAGGCACAAC
AGCTGCGCGAGGAGGAGCGCAAGGAGCAGGCCAACCAGCGGGTGCTGCTC
GAGATTGAGCGTTCCAAGAACTATATCACTAGGGAAAACTTGGATGCAGC
CATTGAGACAGCGTTGGCCAATCCCGTGGACCACAATTTCGCCATCGATA
TGGCCGGTAATCTTTACCACGGACGAAGCACCTCTCAGCTCCCGGACGCC
ACTCCCGAACCCAACCAGCAAGTTTTGAGTAATGCAAGCTTTCTAGACCA
TTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATAATCATAATC
ATAATCATAATCACAACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTT
GGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAA
ATCCAGATGGAGTTCTGAGGTCATTACTGGATCTATCACAGAGTCCCAGC
GAGCTCGATATCAAATTACGCCCCGCCCTGCCACTCATCGCAGTACTGTG
TAATTCATTAGCATTCTGCGACATGGAAGCCATCAACACGGCATGATGAC
CTGATCGCAGCGCATCAGCACCTGTCGCTTGCGTATAATATTTGCCCATG
GGTGAAACGGGGGGCGAGAGTGTCATATGGCCCGTTACAATCAACTGGGT
GACACCCAAGGAATGGCTGACGAAAACATTCCATAAC
UFO03987.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:38:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| mRpS26-RA | 825 | CG7354-RA | 84..758 | 9..683 | 3375 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:38:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 18106967..18107432 | 218..683 | 2330 | 100 | Plus |
| 3L | 28110227 | 3L | 18106662..18106870 | 9..217 | 1045 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 23:38:38 has no hits.
UFO03987.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-03 12:00:14 Download gff for
UFO03987.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpS26-RA | 82..761 | 9..691 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:09:58 Download gff for
UFO03987.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpS26-RA | 84..763 | 9..691 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:09:52 Download gff for
UFO03987.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpS26-RA | 84..763 | 9..691 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:09:52 Download gff for
UFO03987.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 18106662..18106870 | 9..217 | 100 | -> | Plus |
| 3L | 18106967..18107437 | 218..691 | 99 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:09:58 Download gff for
UFO03987.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 18099762..18099970 | 9..217 | 100 | -> | Plus |
| arm_3L | 18100067..18100537 | 218..691 | 99 | == | Plus |
