UFO03989.5prime Sequence
1149 bp (1030 high quality bases) assembled on 2009-02-13
> UFO03989.5prime
CAGTCGACATGGCTGGATTCCTGAAGACAAGAAAGCGCAGCCGGGAGGAT
GAACTGGCCTGCGAGTCGCCCCTTTCGAAGCGCATCAACAACCTGAATCT
GAACTACGAGGATGGGAACAGCAGCAGCAGCAGCAGCTGCAGCATTCCGC
CACTGTCGGGAGGAGGAGCGACTGGTGGATCCGGCGGGTCCGATGCAGCC
GGAAACGGTGTGGCGGCCGGATACGAATACAACCCAGAACTGGGAGCCGA
ACAAAACCCATTTTACTACGAGAAGAACAAGATGCTGTACGACCTGCATG
TCGAGCGCATCAAGCGGAGCAGCCAGGCAAGCTTTCTAGACCATTCGTTT
GGCGCGCGGGCCCAGGTAAGTGGTCATAATCATAATCATAATCATAATCA
TAATCACAACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGATTCT
CACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGA
TGGAGTTCTGAGGTCATTACTGGATCTATCAACAGGAGTCCAAGCGAGCT
CGATATCAAATTACGCCCCGCCCTGCCACTCATCGCAGTACTGTTGTAAT
TCATTAAGCATTCTGCCGACATGGAAGCCATCACAAACGGCATGATGAAC
CTGAATCGCCAGCGGCATCAGCACCTTGTCGCCTTGCGTATAATATTTGC
CCATGGTGAAAACGGGGGCGAAGAAGTTGTCCATATTGGCCACGTTTAAA
TCAAAACTGGTGAAACTCACCCAGGGATTGGCTGAGACGAAAAACATATT
CTCAATAAACCCTTTAGGGAAATAGGCCAGGTTTTCACCGTAACACGCCA
CATCTTGCGAATATATGTGTAGAAACTGCCGGAAATCGTCGTGTATTCAC
TCCAGAGCGATGAAACGTTTCAGTTTGCTCATGGAAACGTGTAACAGGTG
AACACTATCCCATATCACCAGCTCCCCGTCTTTCATTGCCATACGAATTC
CGATGAGCATTCATCAGGCGGGCAGATGTGAATAAAGCCGGATACAACCT
TGGTGCTTATTTCTTTACGTTTAAAAAGCCGTAATATCCAGCCTGACCGT
CTGTTAAGGGTACATGAACAACTGACTGATGCCAAGTTCTTACGAATGC
UFO03989.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:27:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14229-RB | 1018 | CG14229-RB | 108..425 | 9..326 | 1590 | 100 | Plus |
| CG14229-RC | 989 | CG14229-RC | 300..617 | 9..326 | 1590 | 100 | Plus |
| CG14229-RA | 797 | CG14229-RA | 108..425 | 9..326 | 1590 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:27:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 19694570..19694866 | 326..30 | 1485 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:27:37 has no hits.
UFO03989.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-03 12:00:12 Download gff for
UFO03989.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14229-RA | 84..413 | 1..333 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:32:55 Download gff for
UFO03989.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14229-RA | 101..430 | 1..333 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:10:08 Download gff for
UFO03989.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14229-RA | 101..430 | 1..333 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:10:08 Download gff for
UFO03989.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 19694570..19694864 | 32..326 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:32:55 Download gff for
UFO03989.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 19588603..19588897 | 32..326 | 100 | <- | Minus |
