UFO04006.5prime Sequence
1149 bp (1041 high quality bases) assembled on 2010-09-10
> UFO04006.5prime
CAGTCGACATGTGCGGCAATCCGAACACGCGTCTCCTCTCCCGGCTGGTC
ATTGACTTCCTGATTCTCCTAGGAATCTATGGAGCGGCCCTAGTGGTGCT
GCCCCAGCAGTTGTCCACGGCCCAACGGGGATTCCACTGCAGTGATACCA
GCCTGAAGTATCCCTATCGCCAGCCCTGGCTGACCAAGGTCCACCTTACG
ATCGCAGTGGTTGCTCTGCCCGCTGCATTTGTGCTCGTGGTGGAGATGCT
CAGGGCTGCCGTGGTACCCAGCTCCACGGAGCTGACGCAGCGCTTCGTCT
TCGTCGGGGTCCGCATCCCCAGATTCATCAGCGAATGCTACAAGGCCATT
GGCGTTTACCTATTCGGTCTGGGGCTGACCTTGGCGGCGATTCGGCTGAC
TAAGCACTCGACGGGCCGACTGAGGCCCTACTTCTTCGATATCTGCCAGC
CCACATGGGGAACAGAGGGCGGCGAGAGCTGCTCCGACGTGACCGCGCAG
AACTCCACCCTCTACCTCGAGGACTTCAGTTGCACGGAGTTCGCCGCCTC
GCAGGATCTGCTCGCCCTGGTGCGCCACTCCTTCCCCAGCGGATTCGTGT
CCACCACTTGCTACGCCATGGGCTTTCTGATTTTTTATTCCCAGGCCAGA
TTGTTTGCTCCCTGGCTGCGATTAGTCCGAGCCTCCCTGCAACTGGCTTG
TTGCTCTCTGGCCTTGGTGGTTTGCTGGGAGCGCATCTCTACCTACCAGA
ACACTTAACAGATGTGGCAGCTGGAGCTGCCCTTGGTGGGTGGATGGCCT
TCTTTGCAACAGTATTTGTGGCCCACCTCTTTGTGGAGGTGCGAGTAAAC
GCCGTCCCATGCCAAGAAATGAACAGATCTACGGCTACGCGGGATACTAC
ACCAGAGCCACCTACGGCTACGCAAGCTTTCTAGACCATTCGTTTGGCGC
GCGGGCCCAGGTAGTGTCATAATTCATAATCATAATCATAATCATATCAC
ACTAGCCTAGAGATCCTGGTCATGACTGTGGCTTGGATTCTCCACATAAA
ACGCCCGGCGCACGAGCGTTCTGAACAATCCAGATGGGAGTTCTGGAGGG
TCATTACCTGATCTTATCACAGGAGTCAGCCGGATCGATTCAGTACGCC
UFO04006.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:29:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11437-RA | 992 | CG11437-RA | 12..926 | 9..921 | 4525 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:28:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 22468873..22469787 | 9..921 | 4475 | 99.8 | Plus |
Blast to na_te.dros performed on 2014-11-26 14:29:00 has no hits.
UFO04006.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-09-17 09:59:44 Download gff for
UFO04006.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11437-RA | 1..924 | 2..921 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 19:33:51 Download gff for
UFO04006.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11437-RA | 2..926 | 1..921 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:31:53 Download gff for
UFO04006.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11437-RA | 2..926 | 1..921 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:31:53 Download gff for
UFO04006.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 22468863..22469787 | 1..921 | 99 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 19:33:51 Download gff for
UFO04006.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 22461963..22462887 | 1..921 | 99 | == | Plus |
