UFO04010.5prime Sequence
1129 bp (1015 high quality bases) assembled on 2009-02-13
> UFO04010.5prime
CAGTCATCCTGTCCGGTTATCCAAGTGCTTCTCTGGTCACCTTTGCGCTT
TGTTCCATTCTTTGCCTTATTGGAATTGAAGGCAGTCATCTGAGGTTCCC
AGGACCCGCGGCGGGAAGGTTTCTGCAAAGACAGGAACAAGCCCCATATC
CACCAGCAGGCCTGGTCCCCGATCCGCCATTCGACCTGCCAACGGAGGAG
GCGGTTGAATTTCCTCAACCGGAGGATACATATGGCCCTCCACCTGAAAC
ATACGGACCACCGTCTTTGGTGGAAGCGCCAGCTGAGGTCTACGGCCCAC
CGGACCAAATTTATGGACCTCCCGATCAGACCTACGGACCTCCAGACCAG
CCAGCCAATGATGACAGCTCCAACACATTGCCACAAAGCGCAGCTATAAT
TAATTTGGCAAGTCTGCCGCTACCACCCCAGGCTCAGTATGTTCTGCCGC
TTCTGAACCGACTTTCTGCCTTCCGCCCGCAGCGTCCGGTTCTGCGGACT
CCGCAGCGACGGCCGGCTAAGCTTACGGTTCGTCGTCGGCCAGATGCGGT
CAAGATTGTGAATGCTATTAGGCCTACTCCAGTGTTCCCATCGACTCCGC
AGGCTTTGCCCTTCGTGGATCGCCACATTCCTTTTCGCCCACGGCCATCT
CGCCTGATAGTCAATGCGCCTTTCAGACGCCCATCCAGGCAAGCAAGCTT
TCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATA
ATCATAATCATAATCATAATCACACTAGCCTAGGAGATCCTGGTCATGAC
TAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTT
CTGAACAAATCCAGATGGAGTTCTGAGGTCATTACTGGATCTATCAACAG
GAGTCCAAGCGAGCTCGATATCAAATTACGCCCCGCCCTGCCACTCATCG
CAGTACTGTGTAATTCATAGCATCTGCCGACATGGAAGCCATCACAAACG
GCATGATGACCTGATCGGCAGCGCATCAGCACCTTTGTCCGCTTGCGTAT
AATTGCCCATGGTGAACGGGGGCGAGAGTGTCCATATGGCCAGGTTATTC
AACCTGGTTACTCACCAAGGAATTTGGGC
UFO04010.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:19:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14570-RA | 780 | CG14570-RA | 28..710 | 10..692 | 3385 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:19:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 21729745..21730427 | 692..10 | 3385 | 99.7 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:19:21 has no hits.
UFO04010.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-03 12:00:10 Download gff for
UFO04010.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14570-RA | 18..705 | 5..692 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:24:53 Download gff for
UFO04010.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14570-RA | 23..710 | 5..692 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:12:53 Download gff for
UFO04010.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14570-RA | 23..710 | 5..692 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:12:53 Download gff for
UFO04010.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 21729745..21730430 | 5..692 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:24:53 Download gff for
UFO04010.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 21722845..21723530 | 5..692 | 99 | | Minus |
