UFO04017.5prime Sequence
1129 bp (1022 high quality bases) assembled on 2010-09-10
> UFO04017.5prime
CAGTCGACATGTTTTGCCGAATATCCGGCAATAAAAGCCGGGGCAAGGTC
ATAGCCAAAACAGTTCACAGCGATATGCTTTGGCGCTGCGAGTATCTTAT
TTTGGGAATGCTGCTCTTGGCCGAGCTTACCCAGTTGGGTGAAGCGGTGA
CAGCCAATCAGCAAAGGAGAAACAGGAGACTGAGAAGCGACAACGGAACC
AAGAGGTTGACGGGCACAAAAAACCAAACCGGAATCAGAAGCAATCGACG
CCAAGGTACAGCGAGGAAACTCTCCGCCAAGAGGGTCAACCAGAACAAAA
AGGCCGCCACATCGTCCAAGATTCAGTCCAGGATTGTGGGTGGCACCAGT
ACCACTATTTCCACCACACCGTACATTGTTCAGTTGCGTCGAGGATCGAA
TCTGTGTAGCGGTTCCCTCATAACCGAGCAATGGGTTCTAACTGCTGCCC
ATTGCGTCAAGGGATACAGTGCCTCCGATTTCACGGTGCGCGGAGGAACC
ACTACTTTGGATGGGAGTGATGGCGTCACTCGCTCCGTCAGTTCCATTCA
TGTGGCTCCGAAGTTCACCTCGAAGAAAATGAACATGGATGCAGCTTTGC
TGAAGCTGAACCAATCCCTGACGGGCACCAATATCGGAACCATATCAATG
GGCAACTATCGACCCAAGGCCGGTTCAAGGGTACGCATTGCAGGATGGGG
TGTGACCAAGGAAGGTTCTACAACGGCATCCAAAACTCTGCAGACCGCCC
AGATAAGGGTGGTCAGGCAGCAAAAGTGTCGGAAGGACTACCGCGGTCAG
GCTACCATCACCAAGTACATGCTTTGTGCCCGCGCTGCTGGCAAGGATTC
ATGCAGCGGAGACTCCGGTGGCCCAGTGACCAGGAACAACACACTCTTGG
GCATCGTATCCTTTGGCTACGGTGCGCCAGAGCCGGCTACCCAGGTGTAT
ACACAGCCGTGTTTGCGATCCGCCAGTGGGCCACCAACATCATGGCCAAC
AATGCAAGCTTTCTTAGACCAATCGTTGGCCGCGCGGGCCAGGTAGTGGT
ATAATCATAATCTATTCATATCATATCACAACTAGCTAGGGATCTGTCAT
GACTAGGGCCTTGAATTTCCACAAAAACG
UFO04017.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:28:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32270-RA | 2037 | CG32270-RA | 965..1960 | 9..1003 | 4940 | 99.8 | Plus |
| CG32269-RB | 1195 | CG32269-RB | 123..1118 | 9..1003 | 4940 | 99.8 | Plus |
| CG32269-RA | 2037 | CG32269-RA | 965..1960 | 9..1003 | 4940 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:28:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 3207026..3208021 | 1003..9 | 4915 | 99.8 | Minus |
Blast to na_te.dros performed on 2014-11-26 14:28:48 has no hits.
UFO04017.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-09-17 09:59:41 Download gff for
UFO04017.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32270-RA | 958..1965 | 1..1011 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 19:33:44 Download gff for
UFO04017.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32270-RA | 961..1968 | 1..1011 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:31:46 Download gff for
UFO04017.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32269-RA | 961..1968 | 1..1011 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:31:46 Download gff for
UFO04017.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 3207026..3208025 | 1..1003 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 19:33:44 Download gff for
UFO04017.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 3207026..3208025 | 1..1003 | 99 | | Minus |
