UFO04036.5prime Sequence
1078 bp (962 high quality bases) assembled on 2009-02-13
> UFO04036.5prime
CAGTCGACATGATGCACACATTCGAGAACACCTTCATCCGTGGACCATCG
CCGTCATATTCCGACGACGCCAACTCGGAGAACGCGCTCTCTGTGACGCT
GCCCATTGGAGGAGTTGTGCCGGACTTGGACTTTTGTCGCGACGACTCGA
AAACGGATACGGGCGATTACTTCGATGAGAAGTACAACAGCGACAGCTGC
TCCCGCCTGCATCCGGGTCACCAGGGACGCAACACGTTCGCCTTCTGGAC
CATTGTGGTGTTGCTGCTGGTGCTGACCGTTGGCAATCTTCTGCTGACGC
TCACCATTGTGGGTGTGCTTCGCCTGGGCAAAGGTGTCCAGGGCATGGAG
GTGATACCCGAGGTGGATTTGGTGAAGTTCTACGGTACCACGGACTTGGA
GCGCGTGCAGACGAACTCGATTGGCCAGATACACGGCTTCTCGGATGTCC
CGGTGACCATCAGCAGTGATGCTGGTGACGGCGAGGGCGGCGTCCATGTG
CGCGTCTTCCGCAATGGCAATGGAGCAGCCAGCGAACGCGATAGGATCGT
CCTGAACAGGGAGGGTATCCTCGTGCAGGCCACGAACTTGTTCGAGGTCA
AGGACCCCGTCGACAAGCAGCCGATTTTCACCACCCATCGTCCGCAGTAT
AACATTCCGGGCGGAGTGGAGGCGCTGCACGCCAAAGTGGTTAGTGCCAG
CGGCATCGTCAGTCCCATCGACGAGTCCCTGGTGCTGGAGAGCGACGGAC
GCATGGCCATCAGGGGATCCGAGGGCGTCTACTTCGACGGAGCCAGCGTT
GACATGCAGGCCGAGCACCACATTCTCATCAACTCCACGCAGGCGCCACC
ATCCTGGAGGCAGCACGGGTATCTTTCTGGACATGGACCGCATTCCCATC
GTCAGCTCGAGCTGGGTCTCGCACGGGCAGTGTGCAGTACAGATTTGCGT
GTGCATGCCGCATGACGCCTCTCGATCGCATACCCAGGTACACACGGACC
CAGATCCATGCCTCACTCAGCGCAGACGATCCTGCAAATCACGCAAGCTT
CTAGAACATTCGTTGGCGCGCGGGCCCA
UFO04036.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:43:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Scgbeta-RA | 1194 | CG5657-RA | 87..1103 | 9..1011 | 4700 | 98.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:43:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 12421383..12422343 | 964..9 | 4540 | 99.4 | Minus |
Blast to na_te.dros performed on 2014-11-28 21:43:37 has no hits.
UFO04036.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-03 11:54:48 Download gff for
UFO04036.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Scgbeta-RA | 80..1056 | 1..972 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:37:35 Download gff for
UFO04036.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Scgbeta-RA | 80..1056 | 1..972 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:39:00 Download gff for
UFO04036.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Scgbeta-RA | 80..1056 | 1..972 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:39:00 Download gff for
UFO04036.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 12421383..12422350 | 1..964 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:37:35 Download gff for
UFO04036.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 8247105..8248072 | 1..964 | 99 | | Minus |
