UFO04038.5prime Sequence
1150 bp (1024 high quality bases) assembled on 2010-09-10
> UFO04038.5prime
CAGTCGACATGTCACTGAAATACTTACTCATTGCTTGTGCAGTGCTGATC
GGATTGTGTGGAGCTGATGTGTCAGAAATAAAGGCGGTTAAAGTGGATCT
GCCTTTCAATGACTTGCTACCACCGCTGCTGGATGAAGTGAGCACCACGA
CGACAACGACGACGACAACGACAACCACAACGACGACCACAACGGAGAAG
CCAGCCACAACGCTGGCCACAAAGCCAACCAAGAAATCGTACTACCAGAA
GCCAGCTCAGCTGGCAAAGGAGGATAAGTTGAAGACCATTGTCATCAAGC
AGGATGTTTCACAGCTCCCTTTGGATCTACTGCCACCTTTCGAAGACGAG
GTCAAGCCGGCGGAGGACAAGCTGCGGCCAGTGGTTAATACTACGCCAAA
ACCCGTGGTTAGGATCTCTCAGCCGTCTGTGCTCAAGGTCACTCCAAAGG
CTGTTCCCAAGGTCACCCCGCCGCCTGCTCCACGTCCGCAGTACTCTGTT
CAACCAGCCCTAGCATCCCGCCCACAATACTCCGTTCATCCTGCTCCTCA
AGCGATACACCCTCAGCCCACCCGTGCTTCTGGTTTCGGAAGTGGATTCC
AGTCCCGTTTCTCAAACTACTTCCTCACCAGTACCCCTCGACCCAGACGC
GGTCCCCTGCCCACTATCACCCCTTTTCCACGCTTCGTCAGACTGGCAAG
CTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATC
ATAATCATAATCATAATCATAATCACAACTAGCCTAGGAGATCCTGGTCA
TGACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAG
CGTTCTGAACAAATCCAGATGGGAGTTTCTGAGGTCATTACTGGATCTAT
CACCAGGAGTCCAAGCGAGCTCGATATTCAAATTACGCCCCGCCCTGCCA
CTCATCGCAGTACTGTTGTAATTCATTAAAGCATTCTGCCGACATGGAAA
GCCATCCACAACGGCATGAATGACCTGATCGCAGCGGCATCAGCTACCTT
GTCCGCCTTGGCGTATAATATTGCCCATTGGTGAAACCGGGGCGAGGAGT
GTCCCATAATGGCCAGGCTTAATTCAAACCTGGGTGAACTCACCCAGGAA
UFO04038.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:28:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14598-RA | 1230 | CG14598-RA | 88..774 | 9..695 | 3435 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:28:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 7440849..7441520 | 24..695 | 3360 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 14:28:35 has no hits.
UFO04038.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-09-17 09:59:37 Download gff for
UFO04038.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14598-RA | 75..768 | 2..695 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 19:33:35 Download gff for
UFO04038.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14598-RA | 81..774 | 2..695 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:31:38 Download gff for
UFO04038.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14598-RA | 81..774 | 2..695 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:31:38 Download gff for
UFO04038.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 7440849..7441520 | 24..695 | 100 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 19:33:35 Download gff for
UFO04038.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 3266571..3267242 | 24..695 | 100 | == | Plus |
