UFO04064.5prime Sequence
1140 bp (1007 high quality bases) assembled on 2009-04-08
> UFO04064.5prime
CAGTCGACATGAAGCTCCACTGGCTGCTATTAGCAGTCGTACTGATCTGT
GCCCTGTACAGCGCTACGGGCACCAGCCCCACCACGGAAACCAGCACCAG
CACCGAGTCGACCACCGCTACGGGCTCAAGCACTTCGACAACCTCGGCCA
GCACCTCCTCCTCATCCTCGGACACCACCGAGGCCAGCAGCAGCAGCAGC
GATTCGTCCACCAGTTCCAGCAGCTCGTCCTCTAGCTCCAGCAGTTCATC
CAAGAAGAAGGCTGCCGCCAGAAGGAGGCGTGCCGCTCGCAGGAGGCGTC
GTGCCGCACGCAGGAGACGTGCTGCTGCCGCTCGCAGGCGCGCCCAGCGC
AGGCGCAACAGGGGTGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGC
CCAGGTAAGTGGTCATAATCATAATCATAATCATAATCATAATCACAACT
AGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGATTCTCACCAATAAAA
AACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGATGGAGTTCTGA
GGTCATTACTGGATCTATCAACAGGAGTCCAAGCGAGCTCGATATCAAAT
TACGCCCCGCCCTGCCACTCATCGCAGTACTGTTGTAATTCATTAAGCAT
TCTGCCGACATGGAAGCCATCACAAACGGCATGATGAACCTGAATCGCCA
GCGGCATCAGCACCTTGTCGCCTTGCGTATAATATTTGCCCATGGTGAAA
ACGGGGGCGAAGAAGTTGTCCATATTGGCCACGTTTAAATCAAAACTGGT
GAAACTCACCCAGGGATTGGCTGAGACGAAAAACATATTCTCAATAAACC
CTTTAGGGAAATAGGCCAGGTTTTCACCGTAACACGCCACATCTTGCGAA
TATATGTGTAGAAACTGCCGGAAATCGTCGTGTATTCCCTCCAGAAGCGA
TGAAAACGTTTCAGGTTTGCTCATGGAAAACGGTGTAACAGGTGAACACT
TATCCCATTATCACCAGCTTCACCGTCTTTCATTGCCATACGAAATTCCG
ATGACCATTCCTCCAGGCGGCAGATGTGATAAAGGCGGAATAAACCTTGG
CTTATTTTTCTACGGTCTTAAAGCCGTAATTCAGCTGACC
UFO04064.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:48:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14265-RB | 557 | CG14265-RB | 35..391 | 9..365 | 1785 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:48:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 3236296..3236652 | 365..9 | 1785 | 100 | Minus |
Blast to na_te.dros performed 2014-11-28 19:48:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| transib1 | 2167 | transib1 TRANSIB1 2167bp | 230..290 | 931..993 | 138 | 73 | Plus |
UFO04064.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-30 09:29:46 Download gff for
UFO04064.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14265-RB | 23..387 | 1..365 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:14:34 Download gff for
UFO04064.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14265-RB | 27..391 | 1..365 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:39:36 Download gff for
UFO04064.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14265-RB | 27..391 | 1..365 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed on 2014-11-28 20:39:36 has no hits.
Sim4 to na_arms.dmel.RELEASE5 performed on 2013-08-04 23:14:34 has no hits.
