UFO04073.5prime Sequence
1147 bp (1007 high quality bases) assembled on 2010-09-10
> UFO04073.5prime
CAGTCGACATGACAGAGGAAGCTGATTTTAGCGAGCAAATCACCGATGGG
AAAAACAAATCAAATGTGCGCTGCCAGTTTTGCAACTGTTTGATGCTGAA
AGCACAAGAGGGCACCTACAACCAGGAGGAGGTGGATGTGCCACTGATGA
CGCAGAAGCAGGATCGAACGGCGGACAGCCTAAACAGCGAGCCACTGAAA
GACTTCTGGCTGGTCAAGGACATGATGACATTCGAGAACATCGGGTTCTC
CAACACGGTGGACGGCAGAAAGTTTCTGGTTTGCGCGGACTGCGAGCGAG
GACCTGTGGGCTACCATGATCTGAGCACCCGCCACTGCTATCTGGCCCTC
AAGAGGGTGGTGCACAAGGACACCGCAAGCTTTCTAGACCATTCGTTTGG
CGCGCGGGCCCAGGTAAGTGGTCATAATCATAATCATAATCATAATCATA
ATCACAACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGATTCTCA
CCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGATG
GAGTTCTGAGGTCATTACTGGATCTATCAACAGGAGTCCAAGCGAGCTCG
ATATCAAATTACGCCCCGCCCTGCCACTCATCGCAGTACTGTTGTAATTC
ATTAAGCATTCTGCCGACATGGAAGCCATCACAAACGGCATGATGAACCT
GAATCGCCAGCGGCATCAGCACCTTGTCGCCTTGCGTATAATATTTGCCC
ATGGTGAAAACGGGGGCGAAGAAGTTGTCCATATTGGCCACGTTTAAATC
AAAACTGGTGAAACTCACCCAGGGATTGGCTGAGACGAAAAACATATTCT
CAATAAACCCTTTAGGGAAATAGGCCAGGTTTTCACCGTAACACGCCACC
ATCTTGCGAATATTATGTGTAGAAACTGCCGGAAATCGTCGTGGTATTCA
CTCCAGAGCGATGAAAACGTTTCAGTTTGCTCATGGAAAACGTGTTAACA
AGGGTGAAAACTTTCCCAATATCACAGCTCACGTCTTTCATTGCCATACG
AAATTCCCGAATGAAGCATTCATCAGGCGGCAGAAATGTGGAATTACGCG
AATAAACCTGGTGCTTTATTTTCCTTACGGTCTTAAAGCGATAATTC
UFO04073.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:28:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7787-RA | 888 | CG7787-RA | 82..447 | 9..374 | 1830 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:28:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 8320600..8320844 | 130..374 | 1225 | 100 | Plus |
| 2L | 23513712 | 2L | 8320409..8320533 | 9..133 | 625 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 14:28:02 has no hits.
UFO04073.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-09-17 09:59:28 Download gff for
UFO04073.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7787-RA | 86..456 | 9..381 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 19:33:19 Download gff for
UFO04073.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7787-RA | 82..452 | 9..381 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:31:20 Download gff for
UFO04073.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7787-RA | 82..452 | 9..381 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:31:20 Download gff for
UFO04073.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 8320409..8320531 | 9..131 | 100 | -> | Plus |
| 2L | 8320602..8320844 | 132..374 | 100 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 19:33:19 Download gff for
UFO04073.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 8320409..8320531 | 9..131 | 100 | -> | Plus |
| arm_2L | 8320602..8320844 | 132..374 | 100 | == | Plus |
