UFO04085.5prime Sequence
1124 bp (1018 high quality bases) assembled on 2009-02-13
> UFO04085.5prime
CAGTCGACATGAAAACGATAAAACACACAATCGGCTTCCTACTGCTGGCA
GCTTACCTTCCTTGCATGTCCTGGGCAGCTCCTGCCCTGCACTTCAGTGA
CCCAGAGCCCGATGAACTGGAGGCCTATCCCACGTCGCCCAGTCAGGTGT
TGCCCATACAACCCGTGTTGATTTACCCCAAGCCACGTGAGAATCTCTAC
CAGGCGCGAACTTTAGCTGGACGAAATGACGACCAGGACATCATCTTTGT
GAAGCTGCTGCAGGATAAGTCCCATGGCTATCGGCCCAAGCAGCAACGTC
TCGTCATGGAGGAGACGAAGTCCTCGCAGCGCAAAAATCTCGGCCTAAAG
GACATATTCTATGTGAAGGCGCTCACCAACGGACGATTTAGCCATGAGCG
ACTGAAGGTTTACCGGGTGCCCGAGTTCTACGCCATCAGTGTTTTTAGCA
ACGGTGATAAAGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAG
GTAAGTGGTCATAATCATAATCATAATCATAATCATAATCACAACTAGCC
TAGGAGATCCTGGTCATGACTAGTGCTTGGATTCTCACCAATAAAAAACG
CCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGATGGAGTTCTGAGGTC
ATTACTGGATCTATCAACAGGAGTCCAAGCGAGCTCGATATCAAATTACG
CCCCGCCCTGCCACTCATCGCAGTACTGTTGTAATTCATTAAGCATTCTG
CCGACATGGAAAGCCATCACAAACGGGCATGATGAACCTGAATCGCCAGC
GGCATCAGCACCTTGTCGCCTTGCGTATAATATTTGCCCATGGTGAAAAC
GGGGGCGAAGAAGGTTGTCCATATTGGCCACGTTTAAATCAAAACTGGTG
AAACTCACCCAGGGATTGGCTGAGACGAAAAACATATTCTCAATAAACCC
TTTAGGAAATAGGCAGGTTTTCACCGGTACACGCACATCTTGCGAATATA
TGGTGTAGAACTGCCGGAATCGTCTGGTATCACTCCAGGAGGGATGGAAA
CGTTTCAGTGCTCATGGAAACGGGTGTAACAAGGGTGAACCTATCATCAC
AGCTCACGTCTTCATGCCATACGA
UFO04085.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:02:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14356-RA | 740 | CG14356-RA | 201..653 | 9..461 | 2265 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:02:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 14130767..14131211 | 461..17 | 2225 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:02:53 has no hits.
UFO04085.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-03 11:54:25 Download gff for
UFO04085.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14356-RA | 190..655 | 1..467 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:31:22 Download gff for
UFO04085.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14356-RA | 190..655 | 1..467 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:45:58 Download gff for
UFO04085.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14356-RA | 193..658 | 1..467 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:45:58 Download gff for
UFO04085.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 14130767..14131217 | 9..461 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:31:22 Download gff for
UFO04085.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 9956489..9956939 | 9..461 | 99 | | Minus |
