UFO04093.5prime Sequence
1103 bp (980 high quality bases) assembled on 2009-02-13
> UFO04093.5prime
CAGTCGACATGGGTACAAAGCGTCGCAACATCGAGGATGAGCTCTCACGC
TTCGAGGCGGAGATCTCGAAGCCCCCCGCCCGCAATCTCTTCGTGCCCAA
CCAGGTGCGCCCGATCATAGCCGCCAATACGTACCAAAACTCGCAGCACA
AGCTGCAGCATCACCAGGGCAATGGAGGATCGCGTCTGACCGTACCCCCG
CCCCCGATGCCGCCTCCACCCACGTTTATGTCCACCTTCGTGCCTACGGG
CAGTGGAGGTGGTTCTTCCAAGGCTATGTCTGCCACTCCCGTAGTCCTGA
GCAGCGCCCCCAAACTTTATCAGTGCCGGCAGTCTGTGCACGTGCCCACC
GTGGCCGCCGCGCCCTCCATCGACATCAACGCCGTCTCTTTTGACGTAAC
GCAGAAGCTGAAGAAGCTCAAGGCGGAAAAGTCTGGACCCAATCCCATTG
CAGAGGAGGCCATTAAGGCAGCGCGCGCATCATCGGCGCTGCAATCCTTC
CAGACAACAGAGCGGAAAAAGAAAGACCGCAAGACGGTGCGTATCGCTGG
CGGCACCGTGTGGGAGGATACTTCGCTGGCTGACTGGCCCGACGATGACT
TCCGCATCTTTTGTGGTGACTTGGGAAACGACGTCAACGACGAGGTCCTG
ACCCGGACCTTCAACAAGTTCCCCTCGTTTCAGCGGGCCCGTGTGGTGCG
GGACAAGCGCACGGGCAAGAGCAAGGGATTTGGCTTCGTGAGCTTCAGAG
AACCGGCCGACTTTATACGGGCCATGAAGGAGATGGACGGCCGCTATGTG
GGCAGCCGGCCTATCAAACTGCGCAAGAGCACGTGGCGACAACGCAGTCT
TGACGTAGTTAAGAAAAGGAGCGCGAAAAACAGGGGCTTCTGCAGGCCTC
ATTCCATGACTGCAAGCTTTCTAGACCAGTCGTTTGGCGCGCGGGCCCAG
GTAAGTGGTCATAATCATAATTCATAATCCTTATCATAATCACACTAGCC
TAGGAGAATCTGTCATGACTAGGGCTGGATTCCCACATTAAAACGCCCGC
GGCACCGAGCGTTCTGAACAATTCGAATGAAGTCTGAGGTCTTTACTGGA
TCT
UFO04093.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:04:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2931-RA | 1114 | CG2931-RA | 95..1000 | 9..911 | 4440 | 99.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:04:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 5567630..5568521 | 899..9 | 4395 | 99.8 | Minus |
Blast to na_te.dros performed on 2014-11-28 21:04:29 has no hits.
UFO04093.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-03 11:54:20 Download gff for
UFO04093.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2931-RA | 82..1002 | 1..918 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:53:21 Download gff for
UFO04093.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2931-RA | 87..1007 | 1..918 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:40:40 Download gff for
UFO04093.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2931-RA | 87..1007 | 1..918 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:40:40 Download gff for
UFO04093.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 5567630..5568527 | 1..899 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:53:21 Download gff for
UFO04093.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 1393352..1394249 | 1..899 | 99 | | Minus |
