UFO04123.5prime Sequence
1141 bp (1020 high quality bases) assembled on 2009-02-13
> UFO04123.5prime
CAGTCGACATGGTGAAACTAACGCCGGAGCTGATAAACCAGTCGATGCAA
TACATAAACCCATGCCGGGAGCGCGAGCTGGATTTGCGCGGCTATAAGAT
TCCACAAATCGAGAACCTGGGCGCAACTCTGGACCAGTTTGATACCATCG
ACTTGTCCGACAACGATCTGCGCAAGCTGGACAACCTGCCGCATCTGCCG
CGCCTCAAGTGCCTGCTGCTGAACAACAACCGCATCCTGCGCATCAGCGA
AGGGCTGGAGGAGGCGGTGCCCAACCTGGGCTCCATCATTCTCACCGGCA
ACAACCTGCAGGAGCTGAGCGACTTAGAGCCCCTGGTCGGATTCACCAAG
CTGGAAACCATCTGCCTGCTTATCAACCCGGTATCCACGAAGCCCAACTA
CCGCGAGTACATGGCCTACAAGTTCCCGCAGCTGCGGCTACTCGACTTCA
GGAAGATCAAGCAGAAGGACCGCCAGGCGGCGCAGGAGTTCTTCCGCACC
AAGCAGGGCAAGGACGTGCTAAAGGAGATTAGCCGGAAGTCCAAGATGAG
CGCCGCAGCCGCCATAGCTGCAGAGGCGGGGAATGGCAAGGGAAGGGGAT
CGGAAGGCGGACGACTGGCCAATCCGCAGGACATGCAGCGCATCCGCGAG
GCCATCAAGCGGGCCAGCTCTCTGGCAGAGGTGGAGCGTCTATCGCAGAT
CCTGCAAAGCGGCCAGCTGCCGGATAAGTTTCAGCACGAGATGGAGGCGG
TGGCACAGAACGGGGCGGGGCACAACGGTTCGGGGGCCGTGGCCATGGAA
TACGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGG
TCATAATCATAATCATAATCATAATCATAATCACACTAGCCTAGGGAGAT
CCTGGTCATGACTAGTGCTTGGATTCTCACCATAAAAAAACGCCCGGCGG
CCACCGAGCCGTTCTGAACAAATCCAGAATGGAGTTCTGAGGTCATTACT
GGATCTATCACAGGAGTCCAGCGAGCTCGATATTCAAATAACGCCCCGCC
TTGGCACATCATCGACTACTGTGTGTAATTCCATTTAGCATTCTGGCCGA
GCATGGGAAGCCATCACAAACACGGATGGAGATGATACCTC
UFO04123.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:13:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| U2A-RA | 1001 | CG1406-RA | 128..922 | 9..803 | 3975 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:13:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 7675441..7676235 | 803..9 | 3975 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 23:13:48 has no hits.
UFO04123.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-03 12:00:21 Download gff for
UFO04123.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| U2A-RA | 110..912 | 1..803 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:21:10 Download gff for
UFO04123.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| U2A-RA | 120..922 | 1..803 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:54:09 Download gff for
UFO04123.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| U2A-RA | 120..922 | 1..803 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:54:09 Download gff for
UFO04123.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 7675441..7676243 | 1..803 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:21:10 Download gff for
UFO04123.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 3562946..3563748 | 1..803 | 99 | | Minus |
