UFO04170.5prime Sequence
1157 bp (1051 high quality bases) assembled on 2010-09-10
> UFO04170.5prime
CAGTCGACATGGTTCTAGGATTTCTAGTGCGCGGCGGTCTGGTGGCCGCA
ACCGTCTACTACACACAAAAGGTGGGCATCTGGGGAGACTCTGACCAGAC
GGACAAGCTGTACAACGACATCAAGTCGGAGCTGCGCCCGCATGTCCAGA
AGCTGGAGAAGCAGCTGCCCTTCGAAGTGCCGCAGTTGCCCAAAACCGGC
GAGATGCGCTTCCTGGCCAAGCACTACTACAACGAGGGCGTGAAGAACAC
CTTCCGTTTCATCCACATGCTGCCCTGCTACGCAGGCAGGGGCCTCAAGA
AGGTCAAGGACACGTTCCAGGACTTTGCCCAATCCCCAGCCATCGCCGGC
GGTGCGGAGTCCAGTCCGCCGAAGGCAAGCTTTCTAGACCATTCGTTTGG
CGCGCGGGCCCAGGTAAGTGGTCATAATCATAATCATAATCATAATCATA
ATCACAACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGATTCTCA
CCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGATG
GAGTTCTGAGGTCATTACTGGATCTATCAACAGGAGTCCAAGCGAGCTCG
ATATCAAATTACGCCCCGCCCTGCCACTCATCGCAGTACTGTTGTAATTC
ATTAAGCATTCTGCCGACATGGAAGCCATCACAAACGGCATGATGAACCT
GAATCGCCAGCGGCATCAGCACCTTGTCGCCTTGCGTATAATATTTGCCC
ATGGTGAAAACGGGGGCGAAGAAGTTGTCCATATTGGCCACGTTTAAATC
AAAACTGGTGAAACTCACCCAGGGATTGGCTGAGACGAAAAACATATTCT
CAATAAACCCTTTAGGGAATAGGCCAGGTTTTCACCGTAACACGCCACAT
CTTGCGAATATATGTGTAGAAACTGCCGGAAATCGTCGTGTATTCACTCA
GAGCGATGAAACGTTTCAGTTTGCTCATGAAAACGGTGTACAAGGTGAAC
ACCTATCCCATATCACCAGCTCACCGTCTTTCATGCCATACGAAATTCCG
GATGGACATTCATCAAGCGGCCAGAATGTGGATTAAAGGCCGATAAACCT
GGGCTAATTTTCTTTACGGCCTTGAAAAGCCGTAATATCAGCTGACGGTC
TGGGTTA
UFO04170.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:29:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7603-RA | 762 | CG7603-RA | 180..547 | 7..374 | 1840 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:29:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 17466198..17466553 | 19..374 | 1780 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 14:29:35 has no hits.
UFO04170.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-09-17 09:59:53 Download gff for
UFO04170.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7603-RA | 169..549 | 1..381 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 19:34:13 Download gff for
UFO04170.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7603-RA | 173..553 | 1..381 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:32:14 Download gff for
UFO04170.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7603-RA | 173..553 | 1..381 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed on 2014-11-26 15:32:14 has no hits.
Sim4 to na_arms.dmel.RELEASE5 performed on 2013-08-03 19:34:13 has no hits.
