UFO04181.5prime Sequence
1121 bp (1012 high quality bases) assembled on 2010-09-10
> UFO04181.5prime
CAGTCGACATGTTTAAACCGACTGGCGCACCAATTGCTATTCTTGTCCTG
AGCCTGTTGGCGCTGAGCTCCGCGGAGCCGATCCGCCGGAGGTTCTTGGC
GCGCCAAGTGGAGGCTATACCCAGTCCTTCGCCCACCGGATATCCGGAGG
CGGGCATCACCCCGAGTGTTCCCTTCGATTTACCCAGTTCGACTGTCAAG
CCGGAGAACACTTATCTGCCGCCTGATAACACCTATGGACCTCCGGACAA
CACATACGGGCCACCAGATAACACTTATGGACCTCCAGAGACCGACTCCG
TGCCGGCTATTGCTCCCGAGGCTGAGCCGCTACCAGAGAATCCCATCGAG
ACTGATGATATTCCAGAGACTGAGGAAGCATCGGTTGACGGTGCCAAGCT
GCAGCCCGCTGATGAGGACGCCGAGGAGGATGAACCGCAGCTGGATGTTG
CTGAGGATGGCACTGTGATCGTTGTAGCTAGCAGTCTTGACCAGCCACAG
TCCGTCCAGTCCGCCCGACTCTACCAGCGATTTCCGCAAGGACGGCGTTC
CCAGAGGCCCGTTCCTCAGCGTCTAATCCTGCGTCGCAGTTGGGCAAGCT
TTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCAT
AATCATAATCATAATCATAATCACAACTAGCCTAGGAGATCCTGGTCATG
ACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCG
TTCTGAACAAATCCAGATGGAGTTCTGAGGTCATTACTGGATCTATCAAC
AGGAGTCCAAGCGAGCTCGATATCAAATTACGCCCCGCCCTGCCACTCAT
CGCAGTACTGTTGTAATTCATTAAGCATTCTGCCGACATGGAAGCCATCA
CAAACGGCATGATGAACCTGATCGCCAGCGCATCAGCACCTTGTCGCCTT
GCGTATATATTTGCCCATGTGAAAACGGGCGAAGAAGTGTCCATATGTCA
CGTTTATCAACTGTGACCTCACCCAGGATTGCTGAAACGAAAACAATTCC
TCATAACCCGTAAGGGAAATGCAGGTTCCGTAACGCCCATCTGCATATTG
TAACTGCGAATCGCCTGGATT
UFO04181.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:27:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14569-RA | 826 | CG14569-RA | 30..614 | 9..593 | 2925 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:27:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 21730937..21731521 | 593..9 | 2925 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 14:27:15 has no hits.
UFO04181.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-09-17 09:58:54 Download gff for
UFO04181.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14569-RA | 19..619 | 1..602 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 19:32:52 Download gff for
UFO04181.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14569-RA | 22..622 | 1..602 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:30:57 Download gff for
UFO04181.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14569-RA | 22..622 | 1..602 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:30:57 Download gff for
UFO04181.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 21730929..21731528 | 1..602 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 19:32:52 Download gff for
UFO04181.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 21724029..21724628 | 1..602 | 98 | | Minus |
