UFO04184.5prime Sequence
1108 bp (984 high quality bases) assembled on 2010-09-10
> UFO04184.5prime
CAGTCGACATGAACAAACTGAAATCCAGCACGCACCGCGATAAGGTGAAG
AAGTTCATATCGCTGACACACACGGGGGAACAGACGGCAATATTCTGTTT
GCAACAGAACGACTGGAAATTCGAGTTGGCCAGCGACAATTACTTCCAGA
ATCCGGAGTACTATTACCGGGAGTTGGATCGCAAGCGCATCGAGCAGCTA
TTCATGCGCTATCGGGATCCCAGTGATCCCCTAAAGATCGGATCCCAGGG
CGTAATCCACTTCCTGGAGGACTTGGACCTGAAGCCAGACTCAAAACTGG
TGCTGATCATAGCGTGGAAATTCCACGCCGAGGTGCAGTGCGAGTTCTCG
CGTGATGAGTTTATCAATGGCATGTGCGACCTGGGCATCGATAGCATCGA
CAAGCTAAAGACCAAGCTGCCCATCCTTGAGCAGGAGCTGAACGACGCCG
GCAAGTTCAAGGACTTTTACCACTTTACCTTCAACTACGCCAAGGATCCG
GGGCAAAAGGGCATTGACCTGGAAATGGCAATCGCCTACTGGTGCATCGT
TCTTAGTGGGCGCTTCAAGTTCTTGGACATCTGGTGCCAGTTCCTCGAGG
AGAAACACAAGCGGGCCATCTCGCGAGATACGTGGAACCTGCTGCTCGAC
TTTGCCACCAACATCGACGACCGGATGAGCAACTACGATTCGGAGGGCGC
CTGGCCGGTTCTAATAGACGACTTTGTGGAGTGGGTGCCAGGAGAACGAT
CATCTCAAGGAGGACTCCTCGCCGGCATCCGGCTACCAGCAGCAGTCCAG
TGCTAGCTCCAGCTCCCAAAAGAACATATCCAGCGCCTACCAGACCTCGC
ACAGTACAAACATGAACTATGGCGCAAGCTTTCTAGACCATTCGTTTGGC
GCGCGGGCCCAGGTAAGTGTCATATCATATCATAATCATATCATATCACA
CTAGCCTAGGAGAATCCTGTCATGACTAGTGCTTGATCCTCACATAAAAA
ACGCCCGGCGGCAACGACGTTCTGAACAAATCCGGATGGAGTCTGAAGTC
ATACTGAATCATCAAAGATCAGGCGAACTCGATATCAATACGCCCCGGCC
TTGCACTC
UFO04184.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:27:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7427-RE | 1226 | CG7427-RE | 213..1076 | 9..873 | 4300 | 99.9 | Plus |
| CG7427-RA | 1601 | CG7427-RA | 301..1164 | 9..873 | 4300 | 99.9 | Plus |
| CG7427-RD | 1472 | CG7427-RD | 461..1322 | 11..873 | 4290 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:27:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 15564261..15565122 | 11..873 | 4265 | 99.9 | Plus |
Blast to na_te.dros performed on 2014-11-26 14:27:29 has no hits.
UFO04184.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-09-17 09:59:01 Download gff for
UFO04184.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7427-RA | 283..1156 | 1..877 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 19:33:00 Download gff for
UFO04184.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7427-RA | 294..1167 | 1..877 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:31:03 Download gff for
UFO04184.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7427-RA | 294..1167 | 1..877 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:31:03 Download gff for
UFO04184.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 15564259..15565125 | 8..877 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 19:33:00 Download gff for
UFO04184.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 15557359..15558225 | 8..877 | 99 | | Plus |
