UFO04201.5prime Sequence
1142 bp (1043 high quality bases) assembled on 2009-02-18
> UFO04201.5prime
CAGTCGACATGTCACGGATTTTGGTTGTGTTTCTGGTGCTCGGAGTGGGC
TGCTCCCTGGCAGATCCTATATACCGGAACGAAGAGGTTCATATACCGAA
GCTCGATGGACGCATTGTCGGTGGACAGGACACGAACATCACCCAATATC
CGCATCAGATCTCGATGAGGTATAGAGGAAATCACCGATGCGGAGGCACA
ATTTACAGATCAAACCAGATCATCAGTGCTGCCCATTGTGTAAACACCTT
GTCCGGCCCGGAAAACCTTACCATTGTGGCTGGTTCCTCGAACATCTGGT
TCCCCACGGGTCCGCAGCAGGAGTTGGAAGTCCGTGAGATCATCATTCAT
CCCAAGTATCGCACTCTGAACAACGACTACGATGCGGCAATTCTGATCCT
GGATGGGGATTTCGAGTTCAACGACGCCGTGCAGCCGATTGAGTTGGCCA
AGGAGCGGCCCGATCATGATACACCCGTTACCGTGACGGGCTGGGGAACC
ACCAGCGAAGGCGGAACCATCTCCGACGTCCTGCAGGAGGTCAGCGTTAA
TGTGGTGGACAACTCGAACTGCAAGAACGCCTATTCCATTATGCTGACCA
GTCGTATGCTTTGCGCCGGAGTCAACGGAGGTGGAAAGGATGCATGCCAG
GGAGATTCCGGTGGTCCGCTGGTCTACAACAACACACTCCTGGGCATTGT
GTCCTGGGGAACGGGCTGTGCCCGTGAGAAATATCCCGGAGTCTATTGCT
CCGTACCGGATGTTCTCGATTGGCTGGTGGAGACCGTTGCGGATAAAGAG
AGTGTGGGCAAAATCGACTTTCTGGCAAGCTTTTCTAGACCATTTCGTTT
GGCGCGCGGGCCCAGGTAAGTGGTCATAATCATAATCATAATCATAATCA
TAATCACAACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGATTCT
CACCAATAAAAACGCCCGGCGGCAACCGAGCGTTTCTGACAATTCAGATG
GAGTTCTTGAGTTCATTACTGGATCTATTCAACAGGAGTTCAGCGAGCTC
GATATTCAAATTACGCCCGCCCTGCACTCCATCGCAGTTCTGTTTTTTAT
TTCATTTAGCATTCTGCGACATTGAGCCCATCCCAACGCATG
UFO04201.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:03:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| lambdaTry-RA | 952 | CG12350-RA | 21..836 | 9..824 | 4080 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:03:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 11336860..11337675 | 9..824 | 4080 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:03:43 has no hits.
UFO04201.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-03 11:58:17 Download gff for
UFO04201.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| lambdaTry-RA | 6..831 | 1..828 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:31:54 Download gff for
UFO04201.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| lambdaTry-RA | 14..839 | 1..828 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:46:25 Download gff for
UFO04201.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| lambdaTry-RA | 14..839 | 1..828 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:46:25 Download gff for
UFO04201.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 11336853..11337678 | 1..828 | 99 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:31:54 Download gff for
UFO04201.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 7224358..7225183 | 1..828 | 99 | == | Plus |
