UFO04203.5prime Sequence
1128 bp (1040 high quality bases) assembled on 2009-02-18
> UFO04203.5prime
CAGTCGACATGGGCGTCATCTACAAGATACTGAAGCAGCAACGCAGCATG
GATCTCAGCCTGAGCTCGGCCACCAGGTGCAAGGTGCAGGCGGCCATCAA
GCAGCGCCAGCAGCAGCGCCGCCTTGAGGATCACATGGTGGAGGAGCGGG
ATCGGGATCGGGAGCGGGACCAGCAGCCGGATCAGGATCAGAACCAGGTC
CAGAATCACATCGACAAGGATAAGGAGGAGCTGGCCGAGCAGCAATTACA
GCAGCTGTGCAGATTTCTAGCCGAGAATGCGGCGCGAAAAAAGCGTCAGC
GTTTCAAGCTGCAGTACCAATGCAATCTGGCCATCGATCAGGATAACGAT
CAGGAGCAGATGCCGGAGAAGGAGCACTTTGCAGCGCCGCCGCACGAGAT
GGACCTCGAGTTCATAGAGCAGCTGCAGCAATCCTCGCCCGCCAAATCCC
ACGGAGCAACTGGGCAGGCGCCACGTGATAGCATCCTGCTGAAGATTCGC
CACCAGATCTTCGAGAGAAAGCGGCAGAGGCAGCGCCAGTTGGCGGAGCT
GGTGCAGCAGCGAATGGTGGTGTGGCGACCTTGGGCAAGCTTTCTAGACC
ATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATAATCATAAT
CATAATCATAATCACAACTAGCCTAGGAGATCCTGGTCATGACTAGTGCT
TGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACA
AATCCAGATGGAGTTCTGAGGTCATTACTGGATCTATCAACAGGAGTCCA
AGCGAGCTCGATATCAAATTACGCCCCGCCCTGCCACTCATCGCAGTACT
GTTGTAATTCATTAAGCATTCTGCCGACATGGAAGCCATCACAAACGGCA
TGATGAACCTGAATCGCCAGCGGCATCAGCACCTTGTCGCTTGCGTATAA
TATTTGCCCATGGTGAAACGGGGGCGAAGAAGTTGTCATATGCACGTTTA
AATCAAACTGGTGAACTCACCCAGGGATGCTGAAACGAAAACATATTTCT
CAATAACCCTTTAGGAAATAGCAGTTCACCGTAACACGCCCCATCCTGCC
AATATGTGTAGAACTGGCGAAATTCTCT
UFO04203.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:45:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Him-RA | 920 | CG15064-RA | 108..683 | 9..584 | 2880 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:45:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 18210212..18210504 | 292..584 | 1465 | 100 | Plus |
| X | 23542271 | X | 18209534..18209818 | 9..293 | 1425 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:45:11 has no hits.
UFO04203.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-03 11:58:15 Download gff for
UFO04203.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Him-RA | 99..683 | 1..590 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:38:11 Download gff for
UFO04203.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Him-RA | 103..687 | 1..590 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:27:52 Download gff for
UFO04203.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Him-RA | 103..687 | 1..590 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:27:52 Download gff for
UFO04203.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 18209529..18209818 | 1..293 | 98 | -> | Plus |
| X | 18210214..18210508 | 294..590 | 98 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:38:11 Download gff for
UFO04203.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 18104247..18104541 | 294..590 | 98 | == | Plus |
| arm_X | 18103562..18103851 | 1..293 | 98 | -> | Plus |
