UFO04213.5prime Sequence
1123 bp (1025 high quality bases) assembled on 2009-02-18
> UFO04213.5prime
CAGTCGACATGACCAAGTTCGTTGCGAAGAAAGCTATCCTGCTGCTCTCC
CTGCTCCTTCTGGGCACGGCGGAGTCAAAGCCACTGGATGCGGAACAGCA
GCATATCGATGATCAGCATGTGCGAAAGGAGCGTCAGCTGAAGATGGCCG
GTTCTGCGGATCCAGACGTTAAAATGGTGGCCAACGTGACTCCAGCGACG
GGATCTCAACCAATGTCGATGACCATGGGTGTGCCAATGAACCAGATGGC
CCTGAGCTCGGTCGGTGGCCAGTTGGTGCGGTATCCCAACTACCCGGGTC
TGATCTATCCTGGCCTTGCGCCGGCACCTGGCCTAAATGGTGTTCCCGGT
CTGCAGACGAACATTGCCAACAACTATCCCTCGTATCCGGATCCCAATCT
GACTGGTTCAGTTCCTGGCTTCAATCCCTTTGGCTCATTCGGCTACCCAG
GCGTGGCACCCATGTATGGAAACTCCCTGATGTATCCCAACCCCCAGCTG
CCTAATGGATTTGTGCCCAATCCAGCCGTAGATAACTTTCAATCGCTGAA
CAATATTGTCAATATGGCCAATGTTCAGGGATTGGCTGGCGGCAGTTCCG
GAATATATCCAGCACCTCAAGGATTCGGTGGCGTTAGCCCGGGTCTATAT
CCCGCTCCGCAGGGATTCGGTGGAGCCAATCCAGGATTGTATCCAGCACC
TCAGGTCAACATGCAGGGATTGTATCCACCATCCGGCGGTTTCCTGGAGC
GCATGAACATGCAGGGCTATGCCCCAGGCTTTGCAAGCTTTCTAGACCAT
TCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATAATCATAATCA
TAATCATAATCACAACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTG
GATTCTCACCAATTAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAA
TCAGATGGAGTTCTGAGTCATTACTGGATTTATCACAGGAGTCCAGCGAG
CTCGATTATCAATTACGCCCCGCCCTTGCACTTATCGCAGTACTGGTTTT
TAATTTATTTAAGCATTCTGGCGACATGGAAGCCATCACAAAACGGGCAG
TGTATGAACTTGATCTGCCGAGC
UFO04213.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:18:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13216-RA | 888 | CG13216-RA | 29..806 | 5..782 | 3860 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:18:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 11238190..11238967 | 782..5 | 3860 | 99.7 | Minus |
Blast to na_te.dros performed on 2014-11-28 23:18:45 has no hits.
UFO04213.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-03 11:58:10 Download gff for
UFO04213.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13216-RA | 24..810 | 1..790 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:55:47 Download gff for
UFO04213.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13216-RA | 25..811 | 1..790 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:56:55 Download gff for
UFO04213.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13216-RA | 25..811 | 1..790 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:56:55 Download gff for
UFO04213.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 11238185..11238968 | 1..790 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:55:47 Download gff for
UFO04213.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 7125690..7126473 | 1..790 | 98 | | Minus |
