UFO04215.5prime Sequence
1116 bp (1019 high quality bases) assembled on 2009-02-18
> UFO04215.5prime
CAGTCGACATGCACACGGTGTTAACCCGAGGAAACGCCACGGTGGCATAC
ACGCTGAGCGTTCTAGCTTGCCTCACCTTCAGCTGCTTCCTGTCCACCGT
CTTTCTTGACTACCGTACCGATGCAAACATCAACACGGTCAGAGTGCTGG
TGAAGAATGTCCCGGATTACGGAGCGTCCCGGGAGAAGCACGACTTGGGC
TTCGTGACCTTCGATCTGCAAACGAATCTCACAGGCATCTTCAACTGGAA
CGTGAAGCAGCTGTTCCTGTATCTCACCGCCGAGTACCAGACACCGGCCA
ATCAACTCAACCAGGTGGTACTGTGGGACAAGATTATCCTGCGCGGCGAC
AATGCCGTATTGGACTTCAAGAACATGAACACCAAGTACTACTTCTGGGA
CGACGGGAATGGCCTGAAGGACAACCGCAACGTATCGCTATACCTCTCGT
GGAACATCATTCCGAACGCGGGACTCCTTCCCTCCGTTCAGGCCACTGGA
AAGCACCTGTTCAAGTTCCCGGCCGACTATGCCACCTCGTCCATTGCAAG
CTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATC
ATAATCATAATCATAATCATAATCACAACTAGCCTAGGAGATCCTGGTCA
TGACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAG
CGTTCTGAACAAATCCAGATGGAGTTCTGAGGTCATTACTGGATCTATCA
ACAGGAGTCCAAGCGAGCTCGATATCAAATTACGCCCCGCCCTGCCACTC
ATCGCAGTACTGTTGTAATTCATTAAGCATTCTGCCGACATGGAAGCCAT
CACAAACGGCATGATGAACCTGATCGCCAGCGGCATCAGCACCTTGTCGC
CTTGCGTATATATTTGCCCATGTGAAACGGGGCGAGAGTGTCATATTGGC
ACGTTTAAATCAAACTGGTGAACTCACCCAGGATTGCTGAACGAAAACTA
TTCCTCAATAACCCTTAGGAATAGCAGTTTCACGTAACACCGCCAATCTT
GCAATATATGTGTAGAACTGCCGAATCGTCTGTATTCACTCGAGCATAAA
CGTCATTGTCTATGGA
UFO04215.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:27:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Spase22-23-RB | 1694 | CG5677-RB | 79..615 | 9..545 | 2685 | 100 | Plus |
| Spase22-23-RA | 730 | CG5677-RA | 79..615 | 9..545 | 2685 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:27:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 24229421..24229957 | 545..9 | 2685 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:27:17 has no hits.
UFO04215.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-03 11:58:09 Download gff for
UFO04215.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Spase22-23-RA | 73..617 | 9..553 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:32:45 Download gff for
UFO04215.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Spase22-23-RA | 79..623 | 9..553 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:09:58 Download gff for
UFO04215.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Spase22-23-RA | 79..623 | 9..553 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:09:58 Download gff for
UFO04215.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 24229421..24229957 | 9..545 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:32:45 Download gff for
UFO04215.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 20055143..20055679 | 9..545 | 100 | | Minus |
