UFO04219.5prime Sequence
1102 bp (1002 high quality bases) assembled on 2009-02-18
> UFO04219.5prime
CAGTCGACATGGCTGTTTACGGAATAGTGGCTACGGTGCTGGTCCTTTTG
CTGCTCGGCGATGCGTCAGATGTCGAGGCCACTGGACGAATTATTGGCGG
AAGCGATCAGCTGATTCGTAACGCCCCCTGGCAGGTGTCTATTCAGATCA
GTGCGCGCCACGAGTGCGGCGGAGTCATCTATAGCAAGGAGATCATCATC
ACAGCCGGACACTGTCTACATGAGAGATCCGTGACGCTGATGAAGGTGCG
TGTGGGTGCACAGAATCACAACTACGGCGGCACATTGGTTCCTGTGGCGG
CGTACAAAGTCCACGAGCAGTTTGATTCCCGCTTCCTGCACTACGACATT
GCCGTGCTTCGTCTGTCCACACCACTGACCTTTGGCCTCTCAACGAGAGC
CATCAATTTAGCCAGTACGAGTCCATCGGGTGGAACAACAGTCACTGTCA
CGGGTTGGGGCCACACTGATAATGGAGCCCTCTCCGATAGCTTGCAGAAG
GCCCAGTTGCAGATCATCGATCGCGGAGAGTGTGCCTCGCAAAAGTTTGG
CTACGGTGCGGATTTTGTGGGCGAGGAAACAATTTGCGCTGCCAGCACTG
ATGCAGATGCCTGTACGGGAGACTCTGGAGGTCCTTTGGTGGCCAGTAGC
CAGCTGGTGGGCATTGTATCCTGGGGTTACCGGTGTGCGGACGACAACTA
CCCCGGTGTCTATGCCGATGTGGCGATTCTGCGACCTTGGATAGTCAAGG
CGGCCAATGCCATAGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCC
CAGGTAAGTGGTCATAATCATAATCATAATCATAATCATAATCACAACTA
GCCTAGGAGATCCTGGTCATGACTAGTGCTTGGGATTCTCACCAATAAAA
AACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGATGGGAGTTCTG
AGGTCATTACTGGGATCTATCAACAAGGAGTCCAGGCGAGCTCGATATCA
ATTACGGCGGCTGGCACTCATCGGCAGGAATGGTGGTAATTCTTTAGACA
TTCTGCCGACAGGAAACCCATCACAACGGCAAGGAGGAACCTGAATCGGC
CA
UFO04219.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:53:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| iotaTry-RA | 818 | CG7754-RA | 24..779 | 9..764 | 3780 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:53:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 11356743..11357498 | 9..764 | 3780 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:53:43 has no hits.
UFO04219.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-03 11:57:34 Download gff for
UFO04219.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| iotaTry-RA | 14..788 | 1..773 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:11:17 Download gff for
UFO04219.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| iotaTry-RA | 16..790 | 1..773 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:28:58 Download gff for
UFO04219.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| iotaTry-RA | 16..790 | 1..773 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:28:58 Download gff for
UFO04219.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 11356735..11357509 | 1..773 | 98 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:11:17 Download gff for
UFO04219.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 7244240..7245014 | 1..773 | 98 | == | Plus |
