UFO04233.5prime Sequence
1120 bp (1025 high quality bases) assembled on 2009-02-18
> UFO04233.5prime
CAGTCGACATGGGAAAACACAAGAAAACGCAGAAGGTTAAGAAACAACGT
AATGCACAGCTTAAACGCATCATAAAACCCACAGACGCGCGGCTTAAGGA
TCAGATTCGAGTGAAAAGAAAGAAGGCCGAGGATCCGCACCAGATCAAGG
TGCACGAGGCCACCCAGCAGAGCTCCGCTCTGTTCTTCCAGTACAACACC
CAGCTGGGACCGCCGTACCACATCGTTCTGGACACGAACTTCATTAACTT
TAGCATTAAGAACAAACTGGATATTGTGCAAGGTATGATGGACTGTCTGT
ATGCCAAGTGCATACCCTATATCTCCGACTGCGTGCGTGCCGAGCTGGAG
AAGCTGGGCAACAAGTACAAGCTGGCCCTGCGCATCATCTCCGATCCCAG
ATTCGAGCGACTGCCGTGCCTGCACAAGGGCACCTATGCGGACGATTGCC
TCGTGGAGCGGGTGCGCCAGCACAAATGCTACATTGTGGCCACCAACGAC
AAGGACCTTAAGAATCGCATCCGGAAGATTCCCGGCGTGCCCATCATGTA
CGTGGCTGCGCATAAGTACGCGATTGAGCGTATGCCAGAAGCGTATGGAG
TCAAGGCGGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTA
AGTGGTCATAATCATAATCATAATCATAATCATAATCACAACTAGCCTAG
GAGATCCTGGTCATGACTAGTGCTTGGATTCTCACCAATAAAAAACGCCC
GGCGGCAACCGAGCGTTCTGAACAAATCCAGATGGAGTTCTGAGGTCATT
ACTGGATCTATCAACAGGAGTCCAAGCGAGCTCGATATCAAATTACGCCC
CGCCCTGCCACTCATCGCAGTACTGTTGTAATTCATTAAGCATTCTGCCG
ACATGGAAGCCATCACAAACGGCATGATGACCTGATCGCAGCGGCATCAG
CACTTGTCGCTTGCGTATATATTTGCCCATGTGAAACGGGGCGAGAGTGT
CATATGCCACGTTTAATCAACTGGTGAACTCACCCAGATGCTGAAACGAA
AAAATATTCCATACGTAAGAATGCAGTTCCGTAACCGCCCATCTGCAATT
TTGTGTGAACCTGCCGGAAA
UFO04233.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:26:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Bka-RA | 758 | CG4539-RA | 92..691 | 9..608 | 3000 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:26:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 9895440..9896037 | 11..608 | 2990 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:26:55 has no hits.
UFO04233.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-03 11:57:22 Download gff for
UFO04233.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Bka-RA | 81..698 | 1..617 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:32:36 Download gff for
UFO04233.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Bka-RA | 83..700 | 1..617 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:09:47 Download gff for
UFO04233.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Bka-RA | 83..700 | 1..617 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:09:47 Download gff for
UFO04233.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 9895432..9896046 | 1..617 | 98 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:32:36 Download gff for
UFO04233.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 9895432..9896046 | 1..617 | 98 | == | Plus |
