UFO04235.5prime Sequence
1102 bp (1009 high quality bases) assembled on 2009-02-18
> UFO04235.5prime
CAGTCGACATGGATGATGGAAATGAAAACATTAGTATGGAAGTGGTGGAG
CCCGAAGACGCCGAGAGCGACATGAGCTCTGACAGTGGTAGTGACGCAGA
AGACGATACCGCTGAGCCCAAAGCCCCCAAAGAGGTCTACTTGCCCGGAA
CCAAACTCGCAGACGATGAGGAGCTGGTCTGCGATGAGAGTGCGTACGTG
ATGCTGCACCAAGCTTCTACGGGAGCTCCCTGCCTGAGCTTTGATGTCAT
TCCCGACGAGTTGGGCAGCGGACGGCAGTCGTTCCCGATGACGGCTTATA
TTGTGGCCGGCACGCAAGCTTCCCGCGCCCATGTCAACAACCTTATTGTG
ATGAAAATGAGCAACCTGCACAAGACGCAGGACAATGACGGCGACGAAGA
CGAGGAGCTAGAAGACGACCAAGACGACGTGACTGACAGGGAGGAGCTCA
AAAAGCCGCAGATGACATGCGCCCTTGTCAAGCACCAAGGGTGCGTTAAT
CGCGTCCGTGCCCGCCGATTGGGCAATTCGGTCTACGCTGCCTCCTGGAG
CGAACTTGGTCGTGTGAACATTTGGGACCTAACTCAGCCATTGCAGGCCG
TGGAGAACGCTCAGTTGGCCAAGCAGTACGAGCAAAGCGAAGCGCGTCCA
GTGTTTACTTTTGGTGGCCATCAGCAGGAGGGCTTCGCCATCGACTGGAG
TCCCAGTGCAGATGGTGTACTGGCGACAGGGGACTGCCGGCGAGACATAC
ACGTGTGGACTCCGGTAGAAGACGGCACATGGAAAGTTGATCAACGTCCC
CTAGCGGGCCACTCACAGTCAGTTGAAGATCTGCAATGGAGTCCAAACGA
ACGTAGCGTTCTCGCGTCCTGTTCGGTGGACAAAACCATCCGAATTTGGG
ACTGCCGCGCCTCGCTCAGAAAGCATGTATGCTGACATGCGAGGACGCAC
CACCAGAGCGACGTAACGTGATTTCGTGAATCGCAACGAGCCTTTTATCG
CCAGTGGCGGCGACGACGCTACCTCCCATCTGGGACTACGTCAGTTTCGA
AGCAAAAGCCGAATGCCACTTTAAGCACCCCCACGGACCACATCACTACT
GT
UFO04235.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:43:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| l(2)09851-RB | 1811 | CG12792-RB | 100..1199 | 9..1102 | 5200 | 98.7 | Plus |
| l(2)09851-RA | 1536 | CG12792-RA | 100..1199 | 9..1102 | 5200 | 98.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:43:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 5754616..5755715 | 9..1102 | 4970 | 98.5 | Plus |
Blast to na_te.dros performed on 2014-11-28 21:43:56 has no hits.
UFO04235.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-03 11:57:29 Download gff for
UFO04235.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| l(2)09851-RA | 85..1188 | 2..1102 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:37:49 Download gff for
UFO04235.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| l(2)09851-RA | 96..1199 | 2..1102 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:39:09 Download gff for
UFO04235.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| l(2)09851-RA | 96..1199 | 2..1102 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:39:09 Download gff for
UFO04235.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 5754612..5755715 | 2..1102 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:37:49 Download gff for
UFO04235.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 1642117..1643220 | 2..1102 | 98 | | Plus |
