UFO04237.5prime Sequence
1128 bp (1026 high quality bases) assembled on 2009-02-18
> UFO04237.5prime
CAGTCGACATGCCCAAGGTTCGCCGCAGTCGCAAACCACCGCCAGACGGT
TGGGAGCTGATCGAACCAACTCTCGAGGAACTGGAGCAAAAAATGCGCGA
AGCCGAAACGGAACCGCACGAGGGCAAACGCATTACGGAATCCCTTTGGC
CCATTTTCAAGATCCACCACCAGAAGACACGATACATCTACGATCTATTC
TATCGCCGGAAAGCCATCAGCCGGGAATTGTACGACTACTGTCTGAAGGA
GAAGATTGCCGATGGCAATCTGATTGCCAAGTGGAAGAAGTCTGGATACG
AGAACCTATGCTGCCTGCGCTGCATTCAAACGAGGGACACCAATTTCGGC
ACGAACTGCATATGCCGGGTGCCCAAATGCAAACTGGAAGAGGGTCGGAT
CGTTGAGTGTGTCCACTGCGGTTGTCGCGGCTGCTCCGGTGCAAGCTTTC
TAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATAAT
CATAATCATAATCATAATCACAACTAGCCTAGGAGATCCTGGTCATGACT
AGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTC
TGAACAAATCCAGATGGAGTTCTGAGGTCATTACTGGATCTATCAACAGG
AGTCCAAGCGAGCTCGATATCAAATTACGCCCCGCCCTGCCACTCATCGC
AGTACTGTTGTAATTCATTAAGCATTCTGCCGACATGGAAGCCATCACAA
ACGGCATGATGAACCTGAATCGCCAGCGGCATCAGCACCTTGTCGCCTTG
CGTATAATATTTGCCCATGGTGAAAACGGGGGCGAAGAAGTTGTCCATAT
TGGCCACGTTTAAATCAAACTGGTGAACTCACCCAGGGATTGGCTGAGAC
GAAAAACATATTCTCATAAACCCTTTAGGGAAATAGGCCAGGTTTTCACC
GTACACGCCACATCTGCGAATATATGTGTAGAACTGCGGAATCGTCGTGT
ATTCCCTCCAGAGCGATGAAACGTTCAGTTGCTCATGGAAAACGGTGTAC
AGGTGAACACTATCCATATCACCAGCTCACCGTCTTCATGCCAACGAAAT
CGGATGAACATCTCAGCGCAGATGTATA
UFO04237.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:13:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| l(1)10Bb-RA | 934 | CG1639-RA | 124..555 | 9..440 | 2160 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:13:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 11324673..11325012 | 440..101 | 1700 | 100 | Minus |
| X | 23542271 | X | 11325092..11325185 | 102..9 | 470 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:13:42 has no hits.
UFO04237.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-03 12:00:38 Download gff for
UFO04237.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| l(1)10Bb-RA | 107..552 | 1..448 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:41:36 Download gff for
UFO04237.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| l(1)10Bb-RA | 116..561 | 1..448 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:58:29 Download gff for
UFO04237.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| l(1)10Bb-RA | 116..561 | 1..448 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:58:29 Download gff for
UFO04237.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 11324673..11325010 | 103..440 | 100 | <- | Minus |
| X | 11325092..11325193 | 1..102 | 96 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:41:36 Download gff for
UFO04237.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 11218706..11219043 | 103..440 | 100 | <- | Minus |
| arm_X | 11219125..11219226 | 1..102 | 96 | | Minus |
