UFO04259.5prime Sequence
1094 bp (996 high quality bases) assembled on 2009-02-18
> UFO04259.5prime
CAGTCGACATGTTGAGAAAATCGTTTGCCAACCTACCCCGCTTTGGTCAG
ATGTGCGGTCTGCCACGACGCCTGCAGAGCACACAGCCGGAGCAATCGGT
GGAAACGGAACCGGAGGACATCGCCCTGGTGGAACAGCGGATTCTGAAGC
ATCCGGACTACTTCCAAGTGCACAACCTGTTCACCGTGCGCGACCTCTTC
AATGCCCGAGTGCACTATGGCCACAAGGAGGGCTCCCTGGACGACCGAAT
GCGTCCGTACTTGTTCGGCAGTCGATTAGGTCATCTGATCTTCGATCTGG
ACAAGACGGCATCACATCTGCGCGATGCCCTCAACTTTGCCGCACACATT
GCCTTCCGAGATGGCATCATTCTGTTCTTCAACCGCAACGCCATGAACTC
ACATCTCGTGGAGCGAAAGGCCCAGGAGGCCGGTGAATTCTCGCACACTC
GCTTTTGGCGCGGCGGCATCTTTACCAATGCCAATGTGCAATTCGATGCG
GTCACCAGGCTGCCCGATCTTTGCATTTTCCTCAACACTCAAAACAACGT
TATGGCTCAGCACACGGCGGTTCGGGACGCCGCCAAAATGGCCATACCAA
CCATTGGCATAGTGGACAGCAATTGCAATCCCAACCTGATCACCTATCCG
GTGCCCGGCAACGATGACTCGCCGGCCGCAGTGGAGCTCTATTGCAACCT
CTTCAAGGAAGCCATACTGCGTGGCAAGCGGGAACGACGCCAACTCCTTG
GCCTTCCGCCTCTGGACGAATCCCAGCCGCGGCGCAGTCGCAAAACTAAC
GCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCA
TAATCATAATCATAATCATATCATAATCACACTAGCCTAGGAGATCCTGG
TCATGACTAGTGCTTGATTCTCACATAAAAACGCCCGGCGGCACGAGCGT
CTGAACAATCAGATGGAGTCTGAGTCATACTGATCTATCACAGGAGTCAG
CGAGCTCGAATTCATACGCCCCGCCTGCCCTCATCGCAGTATTGTTGTAA
TCATAAGCATTCCTGCCCGACATGGAAGCCATCACAAAACGGCA
UFO04259.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:13:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| mRpS2-RA | 924 | CG2937-RA | 57..847 | 9..799 | 3940 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:13:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 4849516..4850281 | 799..34 | 3815 | 99.9 | Minus |
Blast to na_te.dros performed on 2014-11-28 23:13:51 has no hits.
UFO04259.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-03 12:00:33 Download gff for
UFO04259.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpS2-RA | 56..850 | 9..804 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:21:12 Download gff for
UFO04259.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpS2-RA | 57..851 | 9..804 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:54:10 Download gff for
UFO04259.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpS2-RA | 57..851 | 9..804 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:54:10 Download gff for
UFO04259.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 4849512..4850281 | 34..804 | 99 | <- | Minus |
| 2L | 4850339..4850363 | 9..33 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:21:12 Download gff for
UFO04259.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 4849512..4850281 | 34..804 | 99 | <- | Minus |
| arm_2L | 4850339..4850363 | 9..33 | 100 | | Minus |
