UFO04261.5prime Sequence
1128 bp (1026 high quality bases) assembled on 2009-02-18
> UFO04261.5prime
CAGTCGACATGGTTCGAGTTCTGTTCCTCCACCCGGATTTGGGCATCGGA
GGAGCTGAGCGACTGGTGGTGGATGCCGCTCTGGCACTCAAGGAGCGGGG
TCACCAGGTTAGCTTCCTAACGAATCACCACGACAGCACGCACTGCTTCA
AGGAGACGGCGGACGGCACTTTTCCGGTCCACGTAGTGGGCGACTGGTTG
CCACGCGGGCTCTTCGGAAGATTCTATGCCATCTGTGCCTATCTGCGCAT
GCTCTATGCGGCGATCTACGCCAGTTTTTTTATGCCCCAGCGGGAGCAAG
TGGACGTGGTGGTGTGCGACCTAATCTCTGTGTGCATTCCAGTTCTCCGC
TTCGCCCCTCATCGTCCGAAGGTTCTATTCTACTGCCACTTTCCGGATCA
GCTTCTCAGCAGCCGTGAAGGACTGCTAAAGCGGCTGTACCGCCTGCCCA
TCAACTGGCTGGAGGAGCACACGATCGGTCTAGCAGACAAGGTGCTGGTC
AACTCCAAATTTACGCTACGTGTCTTCCAGGACACCTTTCGCCGACTGAG
CACGGTGCCGGATGTGCTGTATCCTTCACTGCACACCCAGTACTTTGACC
AGATGCAGAAAAAGCTAGAACAGCGGTCTGCTTTACTGGACGAGCCAGTG
CATCCGCGAGTACCACTCAACGCCTTTATCTATCTGGACATCAATCGCTA
CGAGCGCAAGAAGAACCACGCCCTTGCCTTACATTCCCTGCGCCTTCTGG
GCGACATGCTGCCCGCCACGGACTTCAAGCGCTGTCGCCTGATCATCGCC
GGGGGTTACGACACCAGATGCATGGAAAATGTGGAGCACTTCGCGGAGCT
GGAGCACCTTACGGAGGAGTTGAACTTCAGATCACGTTGTGCTGCTACGC
TCGCCTACCGACGAGGAGAATGTCGCCTGCTTTTTGCCGCTCACTGTCTG
CTGTATACGCCAGAGACGAGCACTTCGGCATTGTGCCGCTGGAGGCATGT
ACTGCTCGAAGCCAGTCGTGGCATTAACAGCGGCGGACCCACTGAACCGG
GGGGGAGCCTTCCACTGGCTTTCTGTGCGAAAGACCGAAAAAGCCTTTGT
GAACAATGCTTCCAGCTTTTCGGGACAG
UFO04261.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:10:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG1291-RA | 1477 | CG1291-RA | 184..1312 | 8..1126 | 5230 | 98.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:10:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 3143991..3145072 | 8..1082 | 5000 | 99 | Plus |
Blast to na_te.dros performed 2014-11-28 20:10:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dmir\spock | 4952 | Dmir\spock SPOCK 4952bp Derived from AY144571. | 3649..3686 | 542..504 | 111 | 79.5 | Minus |
UFO04261.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-03 11:57:18 Download gff for
UFO04261.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1291-RA | 177..1281 | 1..1099 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:40:35 Download gff for
UFO04261.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1291-RA | 179..1283 | 1..1099 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:56:42 Download gff for
UFO04261.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1291-RA | 179..1283 | 1..1099 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:56:42 Download gff for
UFO04261.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 3143986..3145090 | 1..1099 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:40:35 Download gff for
UFO04261.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 3143986..3145090 | 1..1099 | 98 | | Plus |
