UFO04271.5prime Sequence
1099 bp (1012 high quality bases) assembled on 2009-02-18
> UFO04271.5prime
CAGTCGACATGTACATTTACCCCAGCTCACCGGAATCAGCATCGTCCTTG
CAGTCCGAAGAGAGTGCGGCCATTAAGATTCAGGCCGGATTTCGTGGCTA
CCGTGTGCGCAAAGAGATCCATCGATCCAGCAAGAATCCCCATCCCAGGC
GGAATCAGCGACAGCGTCCAAAGAACAACGGCCTCATGGAAAACCAGAAC
AATACGGGAAATCCCCGTCCCAGCGGCGAGGATCAGCATACGGCCACCGA
GAATGGTGGTAAATCCGTGGAGGATCGTAGTGCCACCAAGATACAGGCGG
GATTCCGGGGATTCCTGGTGCGAAAGAAGCAGAAAATCGCCACCGATGCC
GCTGTTAAAATTCAGGCTGGCTTCCGGGGATTCAAAACACGCAAAGAATT
GAAACAATGCGAGCCCATTGTGGCAAGCTTTCTAGACCATTCGTTTGGCG
CGCGGGCCCAGGTAAGTGGTCATAATCATAATCATAATCATAATCATAAT
CACAACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGATTCTCACC
AATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGATGGA
GTTCTGAGGTCATTACTGGATCTATCAACAGGAGTCCAAGCGAGCTCGAT
ATCAAATTACGCCCCGCCCTGCCACTCATCGCAGTACTGTTGTAATTCAT
TAAGCATTCTGCCGACATGGAAGCCATCACAAACGGCATGATGAACCTGA
ATCGCCAGCGGCATCAGCACCTTGTCGCCTTGCGTATAATATTTGCCCAT
GGTGAAAACGGGGGCGAAGAAGTTGTCCATATTGGCCACGTTTAAATCAA
AACTGGTGAAACTCACCCAGGGATTGGCTGAGACGAAAAACATATTCTCA
TAAACCCTTTAGGAAATAGGCCAGGTTTTCACCGTACACGCCACATCTGC
GAATATATGTGTAGAACTGCCGGAAATCGTCGTGTATCACTCCAGAGCGA
TGAAACGGTTTCAGTTGCTCATGGAAACGGTGTACAGGGTGAACACTATC
CATATCACCCAGCTCCACCGTCTTTCATGGCATTACGAAATTCCCGATT
UFO04271.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:45:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14687-RA | 740 | CG14687-RA | 129..543 | 8..422 | 2075 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:45:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 10793032..10793446 | 8..422 | 2075 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:45:35 has no hits.
UFO04271.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-03 12:00:27 Download gff for
UFO04271.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14687-RA | 119..551 | 1..431 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:38:30 Download gff for
UFO04271.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14687-RA | 121..553 | 1..431 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:28:07 Download gff for
UFO04271.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14687-RA | 121..553 | 1..431 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:28:07 Download gff for
UFO04271.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 10793024..10793446 | 1..422 | 99 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:38:30 Download gff for
UFO04271.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 6618746..6619168 | 1..422 | 99 | == | Plus |
