UFO04285.5prime Sequence
1082 bp (1000 high quality bases) assembled on 2009-02-18
> UFO04285.5prime
CAGTCGACATGGGTAACGAGACCTCCCTGCCCATGGACATGTGTTCCAAC
TTCGATGCGGACGAGATCCGTAGGCTGGGCAAGCGATTCCGCAAGCTGGA
TCTGGACAACTCGGGTGCGCTGAGCATAGATGAGTTCATGTCGCTGCCGG
AATTGCAGCAGAATCCGCTGGTGCAGCGGGTTATCGATATCTTCGATGCG
GATGGAAACGGGGAGGTGGACTTCAAGGAGTTTATCCAGGGAGTGTCGCA
GTTTAGCGTGCGCGGCGATAAGCTGTCCAAGCTGCGATTCGCCTTCCGCA
TCTATGATATGGACAATGATGGCTACATCTCGAACGGGGAACTCTTCCAG
GTGCTCAAGATGATGGTGGGCAACAATCTGAAGGACACACAGCTGCAGCA
GATCGTGGACAAGACCATTTGCTTTGCGGACAAGGACGAGGATGGCAAGA
TATCGTTCGATGAATTCTGCTCGGTGGTGGGCAATACCGATATTCACAAG
AAAATGGTTGTCGATGTTGCAAGCTTTCTAGACCATTCGTTTGGCGCGCG
GGCCCAGGTAAGTGGTCATAATCATAATCATAATCATAATCATAATCACA
ACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGATTCTCACCAATA
AAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGATGGAGTTC
TGAGGTCATTACTGGATCTATCAACAGGAGTCCAAGCGAGCTCGATATCA
AATTACGCCCCGCCCTGCCACTCATCGCAGTACTGTTGTAATTCATTAAG
CATTCTGCCGACATGGAAGCCATCACAAACGGCATGATGAACCTGAATCG
CCAGCGGCATCAGCACCTTGTCGCCTTGCGTATATATTTGCCCATGGTGA
AACGGGGCGAGAGTGTCCATATTGCCACGTTTAATCAAACTGTGAAACTC
ACCCAGGATTGCTGAGACGAAAAACATATCTCATAACCCTTTAGGAAATA
GGCAGGTTCACGTACACGCCACATCTTGCAAATATATTGTGTAGACTGCG
AAATCGTCTGAATCACTCGAGCGATGAAACGT
UFO04285.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:17:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CanB-RB | 1148 | CG4209-RB | 103..613 | 8..518 | 2555 | 100 | Plus |
| CanB-RA | 1214 | CG4209-RA | 169..679 | 8..518 | 2555 | 100 | Plus |
| CanB2-RB | 2061 | CG11217-RB | 257..765 | 9..517 | 1405 | 85.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:17:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 5333404..5333914 | 8..518 | 2555 | 100 | Plus |
| 2R | 25286936 | 2R | 7787234..7787533 | 52..351 | 825 | 85 | Plus |
| 2R | 25286936 | 2R | 7787597..7787757 | 357..517 | 490 | 87 | Plus |
Blast to na_te.dros performed on 2014-11-28 23:17:54 has no hits.
UFO04285.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-03 11:53:57 Download gff for
UFO04285.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CanB-RA | 158..682 | 1..526 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:55:12 Download gff for
UFO04285.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CanB-RA | 161..685 | 1..526 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:56:31 Download gff for
UFO04285.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CanB-RA | 161..685 | 1..526 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:56:31 Download gff for
UFO04285.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 5333396..5333914 | 1..518 | 99 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:55:12 Download gff for
UFO04285.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 5227429..5227947 | 1..518 | 99 | == | Plus |
