UFO04310.5prime Sequence
1127 bp (1039 high quality bases) assembled on 2009-02-18
> UFO04310.5prime
CAGTCGACATGTTAAGCATTCGTGTTTTAAGGCTACAAAATGGACACTCC
GTTCTTAACAACGCCTGCCAATTGGCACTTTCGCGAAACAAGAGCTCCAA
AAGGTCGAGCAAAGACAACGTAACGCGACAGGGAAAAATATTTGGCTCGT
TGTTTGGAAATCGGCTTAAAGGCAGCAAAAGCCATTGGTATCCATCGCCC
GATGCAGGAACATCAGGCAATCAAAAGTCGCTGCACGCCTTAAAGTTTGG
AACCCCACACTCGAAGACAACTTGCAGCCACAACAATCGACGCATGTCTG
TTCTGAACAAGTTGTTCATGACGAACATCACTGATATTCTGGCCACCGGC
GCAGTTGCCGATTCCATCGTGGGACACGGAGTGCAGATTTCCTATGTCAA
GATCACCAGCGACTTCTCCCGCATCAATGTCTATTGGATGGGCAAGGATG
GCGGGGAGAACCAAGAGCTCGAGAACACATTGAATCGCATGAGCGGCAAA
CTGCAGCACGAGCTATCGCAGCTCCATCTGATGGGCGAAGTGCCAAAGAT
CAAGTTTGTCCGGGACAAAACGAGCACTGGTCTCCATCAGGTCCACGAGG
TTCTGTCCAAAATCGATCTTCAGCACAGTTACTCTAGTTCAAATGCGGAA
GTTGAAGAAAGCGACGCACAGAGTTGTCAGACGGCTGCGGATGAGGAATG
GCCGGAGATGCGACAGGATTTCCTCAGTTTTAACCATAGCTTAGTTATGG
ACAAGATTCTCGGCAAGATGCGCAAGTCCAAAGATGCCTGGGTTAATCAT
AGACAAAATATTGCGAAAACCGCAAGCTTTCTAGACCATTCGTTTGGCGC
GCGGGCCCAGGTAAGTGGTCATAATCATAATCATAATCATAATCATAATC
ACACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGATTCTCACCAA
TAAAAACGCCCGGCGGCAACCGAGCGTTCTGACAATCAGATGGAGTTCTG
AGGTCATTACTGAATCTATCACAGGAGTCCAGCGAGCTCGAAATCAATAC
GCCCGCCTGCCACTCATCCAGTAACTGTTGTATCATAGCATTCTGCCCGA
CATGGAAGGCCATCTCCAAACGGCACG
UFO04310.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:38:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15916-RA | 959 | CG15916-RA | 84..896 | 9..821 | 4065 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:38:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 15890672..15891484 | 9..821 | 4065 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:38:16 has no hits.
UFO04310.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-03 11:53:54 Download gff for
UFO04310.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15916-RA | 65..893 | 1..830 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:49:46 Download gff for
UFO04310.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15916-RA | 75..903 | 1..830 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:08:10 Download gff for
UFO04310.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15916-RA | 75..903 | 1..830 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:08:10 Download gff for
UFO04310.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 15890663..15891492 | 1..829 | 99 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:49:46 Download gff for
UFO04310.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 15784696..15785525 | 1..829 | 99 | -> | Plus |
