Clone UFO04312 Report

Search the DGRC for UFO04312

Clone and Library Details

Library:UFO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2008-06-20
Comments:BD Creator expression clones with C-terminus FLAG HA tag for transgenic expression using PhiC31 integrase system
Original Plate Number:43
Well:12
Vector:pUAST-CFLAGHA-BD-PHI
Associated Gene/TranscriptCG3603-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

UFO04312.5prime Sequence

531 bp assembled on 2009-02-18

> UFO04312.5prime
CAATCCACTGTCAGTGGGAGTACTAGCTGGAAAAGTACCCCTGGTAACAG
GTGCCGGATCAGGAATTGGTCGTGCCACCTGCCGCCTTTTGGCCAGAGAT
GGTGCCCAAGTGATCCCCGTTGACCGCAATCTAAAGGCGGCCCATCAAAC
CCTACAGGAATTGGGCTCTGAGCGATCTGCCGCCCTGGAGGTGGACGTTT
CCTCTGCCCAGAGTGTTCAATTCTCGGTGGACGAGGCCCACAAGAAATTC
CATCACGCACCCAATATTGTGGACAATTCTGCTGGAATAACCCGAGATGG
TTATCTGCTCAAGATGCCCTAAGGGGACTAACATGACTTATACGGGGACA
ATCTGAAGGTCACCTTTCTGGTTACCCAGTCCTATGCCTAGGCGATGATC
GTGTAAAAACTGGAAAACGGCATCATTGTGAACCTCTCATGCATCGTGGC
CAAGATGAACAACGTGGGCCAGGCCAACTATGCGGCCACCAAGGAGGGCG
TGATCTCCTTCACGGAGGTGGTCTCTAAGGA

UFO04312.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:06:32
Subject Length Description Subject Range Query Range Score Percent Strand
CG3603-RB 1018 CG3603-RB 74..596 9..531 2135 93.9 Plus
CG3603-RA 846 CG3603-RA 74..596 9..531 2135 93.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:06:30
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 2948216..2948698 49..531 1950 93.6 Plus
X 23542271 X 2948107..2948151 9..53 210 97.8 Plus
Blast to na_te.dros performed on 2014-11-28 20:06:31 has no hits.

UFO04312.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-03 11:53:52 Download gff for UFO04312.5prime
Subject Subject Range Query Range Percent Splice Strand
CG3603-RA 64..593 1..530 93   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:39:05 Download gff for UFO04312.5prime
Subject Subject Range Query Range Percent Splice Strand
CG3603-RA 66..595 1..530 93   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:54:30 Download gff for UFO04312.5prime
Subject Subject Range Query Range Percent Splice Strand
CG3603-RA 66..595 1..530 93   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:54:30 Download gff for UFO04312.5prime
Subject Subject Range Query Range Percent Splice Strand
X 2948218..2948697 51..530 93   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:39:05 Download gff for UFO04312.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 2842251..2842730 51..530 93   Plus