Clone UFO04323 Report

Search the DGRC for UFO04323

Clone and Library Details

Library:UFO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2008-06-20
Comments:BD Creator expression clones with C-terminus FLAG HA tag for transgenic expression using PhiC31 integrase system
Original Plate Number:43
Well:23
Vector:pUAST-CFLAGHA-BD-PHI
Associated Gene/TranscriptCG9743-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

UFO04323.5prime Sequence

529 bp (29 high quality bases) assembled on 2009-02-18

> UFO04323.5prime
CAATCCACATGTGCCTTTCATCCCCGATTCCCGGCCGGAAACAGGCCACA
TCTGTTGGCCACTGCAACGGATCGTGCAGCCTGGACAGGAATGGCAACCG
CTTTCCACCCATTGTCCCGAATGGAGGAGATCTGAAGCTCAGACGCCATG
CCCCAGACTCTACTTCACACACCCTGCTCAAAGATGACGACAATTTGGGC
TACAAGGAGGAGAACGCGGTCTACAAGGAGCAGCAGCTGCTGCAGCAACA
GGACCAAACGCTGAAGGAGGCGGAGCAGGTGGAGGAGGAAGACGAGAACC
TCCCGCAGATCAAATGGTCGGATCTGGGAGCACCAGCATTCCTGCACATC
GGTGCCCTCTACGGACTGTACCAGCTCTTCTACGCGAACTTCTACAGATT
CCTGTGGGTGGTGGTCACCGTTTGGGTCTCCGGCATCGGCATCTCGGCGG
GAGCCCATCGACTCTGGTCCCACAAGTCCTACACTGCATCGCTGCCCCTG
AGGATTCTGCTGGCCTTTGCCTTTTCGAT

UFO04323.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:48:11
Subject Length Description Subject Range Query Range Score Percent Strand
CG9743-RA 1733 CG9743-RA 192..714 7..529 2210 94.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:48:09
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 30198494..30198894 408..8 1630 93.8 Minus
3R 32079331 3R 30197561..30197682 529..408 580 98.4 Minus
Blast to na_te.dros performed on 2014-11-28 20:48:10 has no hits.

UFO04323.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-03 11:53:44 Download gff for UFO04323.5prime
Subject Subject Range Query Range Percent Splice Strand
CG9743-RA 186..712 1..529 94   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:54:30 Download gff for UFO04323.5prime
Subject Subject Range Query Range Percent Splice Strand
CG9743-RA 188..714 1..529 94   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:18:56 Download gff for UFO04323.5prime
Subject Subject Range Query Range Percent Splice Strand
CG9743-RA 188..714 1..529 94   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:18:56 Download gff for UFO04323.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 30197561..30197681 409..529 98 <- Minus
3R 30198494..30198901 1..408 92   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:54:30 Download gff for UFO04323.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 26023283..26023403 409..529 98 <- Minus
arm_3R 26024216..26024623 1..408 92   Minus