UFO04323.5prime Sequence
529 bp (29 high quality bases) assembled on 2009-02-18
> UFO04323.5prime
CAATCCACATGTGCCTTTCATCCCCGATTCCCGGCCGGAAACAGGCCACA
TCTGTTGGCCACTGCAACGGATCGTGCAGCCTGGACAGGAATGGCAACCG
CTTTCCACCCATTGTCCCGAATGGAGGAGATCTGAAGCTCAGACGCCATG
CCCCAGACTCTACTTCACACACCCTGCTCAAAGATGACGACAATTTGGGC
TACAAGGAGGAGAACGCGGTCTACAAGGAGCAGCAGCTGCTGCAGCAACA
GGACCAAACGCTGAAGGAGGCGGAGCAGGTGGAGGAGGAAGACGAGAACC
TCCCGCAGATCAAATGGTCGGATCTGGGAGCACCAGCATTCCTGCACATC
GGTGCCCTCTACGGACTGTACCAGCTCTTCTACGCGAACTTCTACAGATT
CCTGTGGGTGGTGGTCACCGTTTGGGTCTCCGGCATCGGCATCTCGGCGG
GAGCCCATCGACTCTGGTCCCACAAGTCCTACACTGCATCGCTGCCCCTG
AGGATTCTGCTGGCCTTTGCCTTTTCGAT
UFO04323.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:48:11
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG9743-RA | 1733 | CG9743-RA | 192..714 | 7..529 | 2210 | 94.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:48:09
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 30198494..30198894 | 408..8 | 1630 | 93.8 | Minus |
3R | 32079331 | 3R | 30197561..30197682 | 529..408 | 580 | 98.4 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:48:10 has no hits.
UFO04323.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-03 11:53:44 Download gff for
UFO04323.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9743-RA | 186..712 | 1..529 | 94 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:54:30 Download gff for
UFO04323.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9743-RA | 188..714 | 1..529 | 94 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:18:56 Download gff for
UFO04323.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9743-RA | 188..714 | 1..529 | 94 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:18:56 Download gff for
UFO04323.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 30197561..30197681 | 409..529 | 98 | <- | Minus |
3R | 30198494..30198901 | 1..408 | 92 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:54:30 Download gff for
UFO04323.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 26023283..26023403 | 409..529 | 98 | <- | Minus |
arm_3R | 26024216..26024623 | 1..408 | 92 | | Minus |