UFO04335.5prime Sequence
1048 bp (827 high quality bases) assembled on 2009-02-18
> UFO04335.5prime
CAATCCACATGGCGCTGCGCATCCTGAAAACAGTTAGACAAGTGGCCCAA
CCACTGGCGGTAACCCTGGGCGGCCAGCAAACACAGCAATTGATTCACAC
AACGCCGGCGTGCTGCGAAATCCGGAAATTGGCCCGGTTACGGGTGGTGG
ACAACAGCGATTTGGGAAAGAAAGCGATGGCCGAGGGGCGACCACCGAGG
TGCATCCATGTCTACAACAAACGCGGAGTCGGCTTCATTGGCGATAAGGT
GCTGGTGGCCATCAAGGGACAGATGAAGAAGGGCATTCTCGTGGGACTCA
AGCAGAACCAGAAGCCCAAACAGCCAAAATTCGATAGCAACAACCTGGTG
CTCATCGACGACAATGGCAGTCCGCTGGGCACTCGCATCCATGTGCCCAT
TCCCACGATCCTGCGAACCATCCTCAAGGAGAAGACGCTGGCCAAAGGAG
CCGATTACACCAAGGTTCTGGCCATCGCCAGCAGATATGTTGCAAGCTTT
CTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATAA
TCATAATCATAATCATAATCACAACTAGCCTAGGAGATCCTGGTCATGAC
TAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTT
CTGAACAAATCCAGATGGAGTTCTGAGGTCATTACTGGATCTATCAACAG
GAGTCCAAGCGAGCTCGATATAAATTACGCCCCGCCCTGCCACTCATCGC
AGTACTGTTGTAATTCATTAAGCATTCTGCCGACATGGAAGCCATCACAA
ACGGAATGATGAACCTGAATCGCCAGCGGCATCAGCACTTTGTCGACTTG
CGTATAATATTTGCCCATGGTGAAAACGGGGCGAAGAGTTGTCCATATTG
TCACGTTTAAATCATACTGTGAAACTCATCCATGGATGCTGAACGAAGAC
ATATTCTCATAAACCCTTTACGTATAGTCAGATTTCACCGTAACCCGCCG
CATCTGCGATTATTGTGTAGAACTGCGGTAATCGTCTGCTATTCACGT
UFO04335.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:44:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| mRpL14-RB | 597 | CG14048-RB | 59..541 | 9..491 | 2400 | 99.8 | Plus |
| mRpL14-RA | 653 | CG14048-RA | 115..597 | 9..491 | 2400 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:44:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 2344053..2344535 | 491..9 | 2400 | 99.8 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:44:31 has no hits.
UFO04335.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-03 11:53:37 Download gff for
UFO04335.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpL14-RA | 97..585 | 1..491 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:37:43 Download gff for
UFO04335.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpL14-RA | 109..597 | 1..491 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:27:29 Download gff for
UFO04335.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpL14-RA | 109..597 | 1..491 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:27:29 Download gff for
UFO04335.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 2344053..2344539 | 1..491 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:37:43 Download gff for
UFO04335.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 2238086..2238572 | 1..491 | 98 | | Minus |
